Protein–RNA interactions for Protein: Q8K1X4

Nckap1l, Nck-associated protein 1-like, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1lQ8K1X4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nckap1lQ8K1X4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nckap1lQ8K1X4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nckap1lQ8K1X4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nckap1lQ8K1X4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.19■□□□□ 0.5
Nckap1lQ8K1X4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
Nckap1lQ8K1X4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.19■□□□□ 0.5
Nckap1lQ8K1X4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Nckap1lQ8K1X4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nckap1lQ8K1X4 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.19■□□□□ 0.5
Nckap1lQ8K1X4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nckap1lQ8K1X4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nckap1lQ8K1X4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nckap1lQ8K1X4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nckap1lQ8K1X4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nckap1lQ8K1X4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Nckap1lQ8K1X4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1lQ8K1X4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1lQ8K1X4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1lQ8K1X4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nckap1lQ8K1X4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Nckap1lQ8K1X4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1lQ8K1X4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1lQ8K1X4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Nckap1lQ8K1X4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1lQ8K1X4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Nckap1lQ8K1X4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1lQ8K1X4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nckap1lQ8K1X4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1lQ8K1X4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1lQ8K1X4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1lQ8K1X4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nckap1lQ8K1X4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1lQ8K1X4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1lQ8K1X4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1lQ8K1X4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nckap1lQ8K1X4 Grk6-206ENSMUST00000224995 2971 ntBASIC18.17■□□□□ 0.5
Nckap1lQ8K1X4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Nckap1lQ8K1X4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1lQ8K1X4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1lQ8K1X4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Nckap1lQ8K1X4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1lQ8K1X4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1lQ8K1X4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1lQ8K1X4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1lQ8K1X4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1lQ8K1X4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.17■□□□□ 0.5
Nckap1lQ8K1X4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nckap1lQ8K1X4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nckap1lQ8K1X4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Nckap1lQ8K1X4 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.16■□□□□ 0.5
Nckap1lQ8K1X4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Nckap1lQ8K1X4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nckap1lQ8K1X4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nckap1lQ8K1X4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nckap1lQ8K1X4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nckap1lQ8K1X4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.16■□□□□ 0.5
Nckap1lQ8K1X4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nckap1lQ8K1X4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nckap1lQ8K1X4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nckap1lQ8K1X4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nckap1lQ8K1X4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.15■□□□□ 0.5
Nckap1lQ8K1X4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nckap1lQ8K1X4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nckap1lQ8K1X4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nckap1lQ8K1X4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nckap1lQ8K1X4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.15■□□□□ 0.5
Nckap1lQ8K1X4 Gm27801-201ENSMUST00000184174 223 ntBASIC18.15■□□□□ 0.5
Nckap1lQ8K1X4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.15■□□□□ 0.5
Nckap1lQ8K1X4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nckap1lQ8K1X4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Nckap1lQ8K1X4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nckap1lQ8K1X4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nckap1lQ8K1X4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nckap1lQ8K1X4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
Nckap1lQ8K1X4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.15■□□□□ 0.5
Nckap1lQ8K1X4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Nckap1lQ8K1X4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Nckap1lQ8K1X4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Nckap1lQ8K1X4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Nckap1lQ8K1X4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Nckap1lQ8K1X4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nckap1lQ8K1X4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nckap1lQ8K1X4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nckap1lQ8K1X4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nckap1lQ8K1X4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nckap1lQ8K1X4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nckap1lQ8K1X4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nckap1lQ8K1X4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nckap1lQ8K1X4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nckap1lQ8K1X4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nckap1lQ8K1X4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nckap1lQ8K1X4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nckap1lQ8K1X4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nckap1lQ8K1X4 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.13■□□□□ 0.49
Nckap1lQ8K1X4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nckap1lQ8K1X4 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.13■□□□□ 0.49
Nckap1lQ8K1X4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nckap1lQ8K1X4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nckap1lQ8K1X4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms