Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.24■□□□□ 0.99
Depdc1aQ8CIG0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.24■□□□□ 0.99
Depdc1aQ8CIG0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Depdc1aQ8CIG0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Depdc1aQ8CIG0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Depdc1aQ8CIG0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Depdc1aQ8CIG0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Depdc1aQ8CIG0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Depdc1aQ8CIG0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Depdc1aQ8CIG0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Depdc1aQ8CIG0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Depdc1aQ8CIG0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Depdc1aQ8CIG0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Depdc1aQ8CIG0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.22■□□□□ 0.99
Depdc1aQ8CIG0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Depdc1aQ8CIG0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Depdc1aQ8CIG0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Depdc1aQ8CIG0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Depdc1aQ8CIG0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Depdc1aQ8CIG0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Depdc1aQ8CIG0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Depdc1aQ8CIG0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Depdc1aQ8CIG0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Depdc1aQ8CIG0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Depdc1aQ8CIG0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.21■□□□□ 0.99
Depdc1aQ8CIG0 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.21■□□□□ 0.99
Depdc1aQ8CIG0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Depdc1aQ8CIG0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Depdc1aQ8CIG0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Depdc1aQ8CIG0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Depdc1aQ8CIG0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Depdc1aQ8CIG0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Depdc1aQ8CIG0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Depdc1aQ8CIG0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.2■□□□□ 0.98
Depdc1aQ8CIG0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Depdc1aQ8CIG0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Depdc1aQ8CIG0 Gm37856-201ENSMUST00000191634 999 ntBASIC21.2■□□□□ 0.98
Depdc1aQ8CIG0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.2■□□□□ 0.98
Depdc1aQ8CIG0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Depdc1aQ8CIG0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Depdc1aQ8CIG0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Depdc1aQ8CIG0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Depdc1aQ8CIG0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Depdc1aQ8CIG0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.2■□□□□ 0.98
Depdc1aQ8CIG0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Depdc1aQ8CIG0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Depdc1aQ8CIG0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Depdc1aQ8CIG0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Depdc1aQ8CIG0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1aQ8CIG0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1aQ8CIG0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Depdc1aQ8CIG0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1aQ8CIG0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Depdc1aQ8CIG0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1aQ8CIG0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1aQ8CIG0 Gm20760-201ENSMUST00000179197 648 ntBASIC21.19■□□□□ 0.98
Depdc1aQ8CIG0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.19■□□□□ 0.98
Depdc1aQ8CIG0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1aQ8CIG0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1aQ8CIG0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1aQ8CIG0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1aQ8CIG0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Depdc1aQ8CIG0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1aQ8CIG0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1aQ8CIG0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1aQ8CIG0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Depdc1aQ8CIG0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Depdc1aQ8CIG0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Depdc1aQ8CIG0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Depdc1aQ8CIG0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Depdc1aQ8CIG0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Depdc1aQ8CIG0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Depdc1aQ8CIG0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Depdc1aQ8CIG0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Depdc1aQ8CIG0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Depdc1aQ8CIG0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.18■□□□□ 0.98
Depdc1aQ8CIG0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Depdc1aQ8CIG0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.18■□□□□ 0.98
Depdc1aQ8CIG0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Depdc1aQ8CIG0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Depdc1aQ8CIG0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Depdc1aQ8CIG0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.17■□□□□ 0.98
Depdc1aQ8CIG0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Depdc1aQ8CIG0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Depdc1aQ8CIG0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Depdc1aQ8CIG0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Depdc1aQ8CIG0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Depdc1aQ8CIG0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Depdc1aQ8CIG0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Depdc1aQ8CIG0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Depdc1aQ8CIG0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Depdc1aQ8CIG0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Depdc1aQ8CIG0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.16■□□□□ 0.98
Depdc1aQ8CIG0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Depdc1aQ8CIG0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Depdc1aQ8CIG0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Depdc1aQ8CIG0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Depdc1aQ8CIG0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Depdc1aQ8CIG0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Depdc1aQ8CIG0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms