Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.78■□□□□ 0.76
Rp1l1Q8CGM2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rp1l1Q8CGM2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rp1l1Q8CGM2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rp1l1Q8CGM2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rp1l1Q8CGM2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rp1l1Q8CGM2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rp1l1Q8CGM2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
Rp1l1Q8CGM2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.77■□□□□ 0.76
Rp1l1Q8CGM2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Rp1l1Q8CGM2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rp1l1Q8CGM2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rp1l1Q8CGM2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rp1l1Q8CGM2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rp1l1Q8CGM2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rp1l1Q8CGM2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rp1l1Q8CGM2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rp1l1Q8CGM2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.76■□□□□ 0.75
Rp1l1Q8CGM2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.76■□□□□ 0.75
Rp1l1Q8CGM2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rp1l1Q8CGM2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rp1l1Q8CGM2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.76■□□□□ 0.75
Rp1l1Q8CGM2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rp1l1Q8CGM2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rp1l1Q8CGM2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rp1l1Q8CGM2 Gm18025-201ENSMUST00000221733 862 ntBASIC19.75■□□□□ 0.75
Rp1l1Q8CGM2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rp1l1Q8CGM2 Mtag2-201ENSMUST00000058665 714 ntBASIC19.75■□□□□ 0.75
Rp1l1Q8CGM2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rp1l1Q8CGM2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rp1l1Q8CGM2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.75■□□□□ 0.75
Rp1l1Q8CGM2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rp1l1Q8CGM2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rp1l1Q8CGM2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.75■□□□□ 0.75
Rp1l1Q8CGM2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rp1l1Q8CGM2 Gm27741-201ENSMUST00000185060 237 ntBASIC19.75■□□□□ 0.75
Rp1l1Q8CGM2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rp1l1Q8CGM2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.74■□□□□ 0.75
Rp1l1Q8CGM2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rp1l1Q8CGM2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.74■□□□□ 0.75
Rp1l1Q8CGM2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rp1l1Q8CGM2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rp1l1Q8CGM2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rp1l1Q8CGM2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.74■□□□□ 0.75
Rp1l1Q8CGM2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rp1l1Q8CGM2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rp1l1Q8CGM2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.74■□□□□ 0.75
Rp1l1Q8CGM2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.74■□□□□ 0.75
Rp1l1Q8CGM2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Rp1l1Q8CGM2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rp1l1Q8CGM2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rp1l1Q8CGM2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rp1l1Q8CGM2 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.73■□□□□ 0.75
Rp1l1Q8CGM2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.73■□□□□ 0.75
Rp1l1Q8CGM2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.73■□□□□ 0.75
Rp1l1Q8CGM2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rp1l1Q8CGM2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rp1l1Q8CGM2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rp1l1Q8CGM2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rp1l1Q8CGM2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rp1l1Q8CGM2 Zfp783-201ENSMUST00000095946 670 ntBASIC19.72■□□□□ 0.75
Rp1l1Q8CGM2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rp1l1Q8CGM2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rp1l1Q8CGM2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Rp1l1Q8CGM2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rp1l1Q8CGM2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rp1l1Q8CGM2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.71■□□□□ 0.75
Rp1l1Q8CGM2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.71■□□□□ 0.75
Rp1l1Q8CGM2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rp1l1Q8CGM2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.71■□□□□ 0.75
Rp1l1Q8CGM2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rp1l1Q8CGM2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rp1l1Q8CGM2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rp1l1Q8CGM2 Flg-201ENSMUST00000050758 1488 ntBASIC19.71■□□□□ 0.75
Rp1l1Q8CGM2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rp1l1Q8CGM2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rp1l1Q8CGM2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Rp1l1Q8CGM2 Gm10517-202ENSMUST00000192970 758 ntBASIC19.71■□□□□ 0.75
Rp1l1Q8CGM2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.71■□□□□ 0.75
Rp1l1Q8CGM2 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.71■□□□□ 0.75
Rp1l1Q8CGM2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.7■□□□□ 0.74
Rp1l1Q8CGM2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rp1l1Q8CGM2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rp1l1Q8CGM2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.7■□□□□ 0.74
Rp1l1Q8CGM2 Gm43183-201ENSMUST00000200632 547 ntBASIC19.7■□□□□ 0.74
Rp1l1Q8CGM2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rp1l1Q8CGM2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rp1l1Q8CGM2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rp1l1Q8CGM2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rp1l1Q8CGM2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.69■□□□□ 0.74
Rp1l1Q8CGM2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rp1l1Q8CGM2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rp1l1Q8CGM2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rp1l1Q8CGM2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.69■□□□□ 0.74
Rp1l1Q8CGM2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rp1l1Q8CGM2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.69■□□□□ 0.74
Rp1l1Q8CGM2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Rp1l1Q8CGM2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rp1l1Q8CGM2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rp1l1Q8CGM2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms