Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Vcpip1Q8CDG3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vcpip1Q8CDG3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vcpip1Q8CDG3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.13■□□□□ 0.81
Vcpip1Q8CDG3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vcpip1Q8CDG3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vcpip1Q8CDG3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Vcpip1Q8CDG3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vcpip1Q8CDG3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Vcpip1Q8CDG3 Gm27801-201ENSMUST00000184174 223 ntBASIC20.12■□□□□ 0.81
Vcpip1Q8CDG3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.12■□□□□ 0.81
Vcpip1Q8CDG3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Vcpip1Q8CDG3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vcpip1Q8CDG3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vcpip1Q8CDG3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Vcpip1Q8CDG3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vcpip1Q8CDG3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vcpip1Q8CDG3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vcpip1Q8CDG3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vcpip1Q8CDG3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vcpip1Q8CDG3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vcpip1Q8CDG3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcpip1Q8CDG3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vcpip1Q8CDG3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcpip1Q8CDG3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcpip1Q8CDG3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcpip1Q8CDG3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Vcpip1Q8CDG3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcpip1Q8CDG3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.11■□□□□ 0.81
Vcpip1Q8CDG3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.11■□□□□ 0.81
Vcpip1Q8CDG3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.11■□□□□ 0.81
Vcpip1Q8CDG3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcpip1Q8CDG3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcpip1Q8CDG3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcpip1Q8CDG3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcpip1Q8CDG3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcpip1Q8CDG3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcpip1Q8CDG3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcpip1Q8CDG3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vcpip1Q8CDG3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vcpip1Q8CDG3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Vcpip1Q8CDG3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Vcpip1Q8CDG3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vcpip1Q8CDG3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.1■□□□□ 0.81
Vcpip1Q8CDG3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.1■□□□□ 0.81
Vcpip1Q8CDG3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vcpip1Q8CDG3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
Vcpip1Q8CDG3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vcpip1Q8CDG3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Vcpip1Q8CDG3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vcpip1Q8CDG3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Vcpip1Q8CDG3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vcpip1Q8CDG3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Vcpip1Q8CDG3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Vcpip1Q8CDG3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Vcpip1Q8CDG3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vcpip1Q8CDG3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vcpip1Q8CDG3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vcpip1Q8CDG3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vcpip1Q8CDG3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Vcpip1Q8CDG3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.09■□□□□ 0.81
Vcpip1Q8CDG3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vcpip1Q8CDG3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vcpip1Q8CDG3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.09■□□□□ 0.81
Vcpip1Q8CDG3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Vcpip1Q8CDG3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Vcpip1Q8CDG3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vcpip1Q8CDG3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Vcpip1Q8CDG3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vcpip1Q8CDG3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Vcpip1Q8CDG3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vcpip1Q8CDG3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Vcpip1Q8CDG3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.08■□□□□ 0.81
Vcpip1Q8CDG3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vcpip1Q8CDG3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Vcpip1Q8CDG3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vcpip1Q8CDG3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Vcpip1Q8CDG3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vcpip1Q8CDG3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.08■□□□□ 0.8
Vcpip1Q8CDG3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vcpip1Q8CDG3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vcpip1Q8CDG3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.07■□□□□ 0.8
Vcpip1Q8CDG3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.07■□□□□ 0.8
Vcpip1Q8CDG3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vcpip1Q8CDG3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.07■□□□□ 0.8
Vcpip1Q8CDG3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vcpip1Q8CDG3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vcpip1Q8CDG3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.07■□□□□ 0.8
Vcpip1Q8CDG3 Gm26833-201ENSMUST00000180899 440 ntBASIC20.07■□□□□ 0.8
Vcpip1Q8CDG3 Gm43017-201ENSMUST00000198296 752 ntBASIC20.07■□□□□ 0.8
Vcpip1Q8CDG3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vcpip1Q8CDG3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vcpip1Q8CDG3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vcpip1Q8CDG3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.07■□□□□ 0.8
Vcpip1Q8CDG3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Vcpip1Q8CDG3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vcpip1Q8CDG3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.06■□□□□ 0.8
Vcpip1Q8CDG3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vcpip1Q8CDG3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Vcpip1Q8CDG3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms