Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim9Q8C7M3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim9Q8C7M3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim9Q8C7M3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim9Q8C7M3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Trim9Q8C7M3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim9Q8C7M3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Trim9Q8C7M3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim9Q8C7M3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.74■□□□□ 0.91
Trim9Q8C7M3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Trim9Q8C7M3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
Trim9Q8C7M3 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.74■□□□□ 0.91
Trim9Q8C7M3 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.74■□□□□ 0.91
Trim9Q8C7M3 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.74■□□□□ 0.91
Trim9Q8C7M3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Trim9Q8C7M3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim9Q8C7M3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trim9Q8C7M3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim9Q8C7M3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim9Q8C7M3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim9Q8C7M3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim9Q8C7M3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim9Q8C7M3 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.73■□□□□ 0.91
Trim9Q8C7M3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim9Q8C7M3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.73■□□□□ 0.91
Trim9Q8C7M3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim9Q8C7M3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim9Q8C7M3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.73■□□□□ 0.91
Trim9Q8C7M3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim9Q8C7M3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim9Q8C7M3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Trim9Q8C7M3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim9Q8C7M3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim9Q8C7M3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim9Q8C7M3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim9Q8C7M3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim9Q8C7M3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim9Q8C7M3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim9Q8C7M3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.72■□□□□ 0.91
Trim9Q8C7M3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim9Q8C7M3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim9Q8C7M3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim9Q8C7M3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim9Q8C7M3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim9Q8C7M3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim9Q8C7M3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Trim9Q8C7M3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim9Q8C7M3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Trim9Q8C7M3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim9Q8C7M3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim9Q8C7M3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim9Q8C7M3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim9Q8C7M3 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.71■□□□□ 0.91
Trim9Q8C7M3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim9Q8C7M3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Trim9Q8C7M3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim9Q8C7M3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim9Q8C7M3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim9Q8C7M3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim9Q8C7M3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim9Q8C7M3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trim9Q8C7M3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim9Q8C7M3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim9Q8C7M3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Trim9Q8C7M3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
Trim9Q8C7M3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim9Q8C7M3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim9Q8C7M3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim9Q8C7M3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim9Q8C7M3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim9Q8C7M3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim9Q8C7M3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim9Q8C7M3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.7■□□□□ 0.9
Trim9Q8C7M3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Trim9Q8C7M3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim9Q8C7M3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim9Q8C7M3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim9Q8C7M3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim9Q8C7M3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim9Q8C7M3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim9Q8C7M3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim9Q8C7M3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.69■□□□□ 0.9
Trim9Q8C7M3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.69■□□□□ 0.9
Trim9Q8C7M3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Trim9Q8C7M3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim9Q8C7M3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim9Q8C7M3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim9Q8C7M3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim9Q8C7M3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim9Q8C7M3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim9Q8C7M3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim9Q8C7M3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trim9Q8C7M3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim9Q8C7M3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim9Q8C7M3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim9Q8C7M3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Trim9Q8C7M3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim9Q8C7M3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim9Q8C7M3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim9Q8C7M3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms