Protein–RNA interactions for Protein: Q8C5U0

4933409G03Rik, RIKEN cDNA 4933409G03 gene, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933409G03RikQ8C5U0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
4933409G03RikQ8C5U0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
4933409G03RikQ8C5U0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
4933409G03RikQ8C5U0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
4933409G03RikQ8C5U0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
4933409G03RikQ8C5U0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
4933409G03RikQ8C5U0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
4933409G03RikQ8C5U0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
4933409G03RikQ8C5U0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
4933409G03RikQ8C5U0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
4933409G03RikQ8C5U0 Gm44549-201ENSMUST00000208351 577 ntBASIC20.37■□□□□ 0.85
4933409G03RikQ8C5U0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
4933409G03RikQ8C5U0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
4933409G03RikQ8C5U0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
4933409G03RikQ8C5U0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.37■□□□□ 0.85
4933409G03RikQ8C5U0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
4933409G03RikQ8C5U0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
4933409G03RikQ8C5U0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
4933409G03RikQ8C5U0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
4933409G03RikQ8C5U0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
4933409G03RikQ8C5U0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
4933409G03RikQ8C5U0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
4933409G03RikQ8C5U0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.36■□□□□ 0.85
4933409G03RikQ8C5U0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
4933409G03RikQ8C5U0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
4933409G03RikQ8C5U0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
4933409G03RikQ8C5U0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
4933409G03RikQ8C5U0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
4933409G03RikQ8C5U0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.36■□□□□ 0.85
4933409G03RikQ8C5U0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
4933409G03RikQ8C5U0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
4933409G03RikQ8C5U0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
4933409G03RikQ8C5U0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.35■□□□□ 0.85
4933409G03RikQ8C5U0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
4933409G03RikQ8C5U0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
4933409G03RikQ8C5U0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
4933409G03RikQ8C5U0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
4933409G03RikQ8C5U0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
4933409G03RikQ8C5U0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
4933409G03RikQ8C5U0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
4933409G03RikQ8C5U0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
4933409G03RikQ8C5U0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
4933409G03RikQ8C5U0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
4933409G03RikQ8C5U0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
4933409G03RikQ8C5U0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.34■□□□□ 0.85
4933409G03RikQ8C5U0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
4933409G03RikQ8C5U0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
4933409G03RikQ8C5U0 Gm27275-201ENSMUST00000184318 272 ntBASIC20.34■□□□□ 0.85
4933409G03RikQ8C5U0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
4933409G03RikQ8C5U0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
4933409G03RikQ8C5U0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
4933409G03RikQ8C5U0 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.33■□□□□ 0.85
4933409G03RikQ8C5U0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
4933409G03RikQ8C5U0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
4933409G03RikQ8C5U0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
4933409G03RikQ8C5U0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
4933409G03RikQ8C5U0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.33■□□□□ 0.85
4933409G03RikQ8C5U0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.33■□□□□ 0.85
4933409G03RikQ8C5U0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
4933409G03RikQ8C5U0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.33■□□□□ 0.85
4933409G03RikQ8C5U0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
4933409G03RikQ8C5U0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
4933409G03RikQ8C5U0 Dio3-201ENSMUST00000097228 1449 ntBASIC20.33■□□□□ 0.84
4933409G03RikQ8C5U0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
4933409G03RikQ8C5U0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
4933409G03RikQ8C5U0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
4933409G03RikQ8C5U0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
4933409G03RikQ8C5U0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
4933409G03RikQ8C5U0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.32■□□□□ 0.84
4933409G03RikQ8C5U0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
4933409G03RikQ8C5U0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
4933409G03RikQ8C5U0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
4933409G03RikQ8C5U0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
4933409G03RikQ8C5U0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
4933409G03RikQ8C5U0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
4933409G03RikQ8C5U0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
4933409G03RikQ8C5U0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
4933409G03RikQ8C5U0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
4933409G03RikQ8C5U0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
4933409G03RikQ8C5U0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
4933409G03RikQ8C5U0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
4933409G03RikQ8C5U0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
4933409G03RikQ8C5U0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
4933409G03RikQ8C5U0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
4933409G03RikQ8C5U0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
4933409G03RikQ8C5U0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
4933409G03RikQ8C5U0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
4933409G03RikQ8C5U0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.31■□□□□ 0.84
4933409G03RikQ8C5U0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
4933409G03RikQ8C5U0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
4933409G03RikQ8C5U0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
4933409G03RikQ8C5U0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
4933409G03RikQ8C5U0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.3■□□□□ 0.84
4933409G03RikQ8C5U0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
4933409G03RikQ8C5U0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
4933409G03RikQ8C5U0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
4933409G03RikQ8C5U0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
4933409G03RikQ8C5U0 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.3■□□□□ 0.84
4933409G03RikQ8C5U0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
4933409G03RikQ8C5U0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms