Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ccdc60Q8C4J0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ccdc60Q8C4J0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC23.95■■□□□ 1.42
Ccdc60Q8C4J0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Ccdc60Q8C4J0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ccdc60Q8C4J0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ccdc60Q8C4J0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Ccdc60Q8C4J0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ccdc60Q8C4J0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ccdc60Q8C4J0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ccdc60Q8C4J0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ccdc60Q8C4J0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Ccdc60Q8C4J0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Ccdc60Q8C4J0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ccdc60Q8C4J0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ccdc60Q8C4J0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ccdc60Q8C4J0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Ccdc60Q8C4J0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ccdc60Q8C4J0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ccdc60Q8C4J0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Ccdc60Q8C4J0 Gm5784-201ENSMUST00000179344 2478 ntBASIC23.93■■□□□ 1.42
Ccdc60Q8C4J0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Ccdc60Q8C4J0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Ccdc60Q8C4J0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ccdc60Q8C4J0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ccdc60Q8C4J0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ccdc60Q8C4J0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
Ccdc60Q8C4J0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ccdc60Q8C4J0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ccdc60Q8C4J0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Ccdc60Q8C4J0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Ccdc60Q8C4J0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ccdc60Q8C4J0 BC021767-201ENSMUST00000126387 1716 ntBASIC23.93■■□□□ 1.42
Ccdc60Q8C4J0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ccdc60Q8C4J0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Ccdc60Q8C4J0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ccdc60Q8C4J0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ccdc60Q8C4J0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ccdc60Q8C4J0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ccdc60Q8C4J0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ccdc60Q8C4J0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ccdc60Q8C4J0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ccdc60Q8C4J0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ccdc60Q8C4J0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ccdc60Q8C4J0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Ccdc60Q8C4J0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ccdc60Q8C4J0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC23.91■■□□□ 1.42
Ccdc60Q8C4J0 AC164629.5-201ENSMUST00000220387 632 ntBASIC23.91■■□□□ 1.42
Ccdc60Q8C4J0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ccdc60Q8C4J0 Gm10167-201ENSMUST00000150411 1479 ntBASIC23.91■■□□□ 1.42
Ccdc60Q8C4J0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ccdc60Q8C4J0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC23.91■■□□□ 1.42
Ccdc60Q8C4J0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ccdc60Q8C4J0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ccdc60Q8C4J0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ccdc60Q8C4J0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC23.9■■□□□ 1.42
Ccdc60Q8C4J0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC23.9■■□□□ 1.42
Ccdc60Q8C4J0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC23.9■■□□□ 1.42
Ccdc60Q8C4J0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC23.9■■□□□ 1.42
Ccdc60Q8C4J0 Slc35b2-207ENSMUST00000226086 850 ntBASIC23.9■■□□□ 1.42
Ccdc60Q8C4J0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Ccdc60Q8C4J0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ccdc60Q8C4J0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Ccdc60Q8C4J0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ccdc60Q8C4J0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ccdc60Q8C4J0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ccdc60Q8C4J0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ccdc60Q8C4J0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
Ccdc60Q8C4J0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC23.89■■□□□ 1.41
Ccdc60Q8C4J0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Ccdc60Q8C4J0 Gm19094-201ENSMUST00000209791 1246 ntBASIC23.89■■□□□ 1.41
Ccdc60Q8C4J0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.41
Ccdc60Q8C4J0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ccdc60Q8C4J0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Ccdc60Q8C4J0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ccdc60Q8C4J0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ccdc60Q8C4J0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ccdc60Q8C4J0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ccdc60Q8C4J0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc60Q8C4J0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC23.88■■□□□ 1.41
Ccdc60Q8C4J0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc60Q8C4J0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc60Q8C4J0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Ccdc60Q8C4J0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc60Q8C4J0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc60Q8C4J0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC23.88■■□□□ 1.41
Ccdc60Q8C4J0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc60Q8C4J0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc60Q8C4J0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc60Q8C4J0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc60Q8C4J0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc60Q8C4J0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc60Q8C4J0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc60Q8C4J0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc60Q8C4J0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC23.87■■□□□ 1.41
Ccdc60Q8C4J0 Gm37179-201ENSMUST00000194862 823 ntBASIC23.87■■□□□ 1.41
Ccdc60Q8C4J0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC23.87■■□□□ 1.41
Ccdc60Q8C4J0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc60Q8C4J0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC23.87■■□□□ 1.41
Ccdc60Q8C4J0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms