Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.66■□□□□ 0.26
Rft1Q8C3B8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Rft1Q8C3B8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.66■□□□□ 0.26
Rft1Q8C3B8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rft1Q8C3B8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rft1Q8C3B8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.66■□□□□ 0.26
Rft1Q8C3B8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rft1Q8C3B8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.66■□□□□ 0.26
Rft1Q8C3B8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rft1Q8C3B8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rft1Q8C3B8 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.66■□□□□ 0.26
Rft1Q8C3B8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rft1Q8C3B8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rft1Q8C3B8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rft1Q8C3B8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rft1Q8C3B8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Gm12251-201ENSMUST00000117893 792 ntBASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rft1Q8C3B8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rft1Q8C3B8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rft1Q8C3B8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rft1Q8C3B8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rft1Q8C3B8 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.64■□□□□ 0.25
Rft1Q8C3B8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.64■□□□□ 0.25
Rft1Q8C3B8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.64■□□□□ 0.25
Rft1Q8C3B8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rft1Q8C3B8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rft1Q8C3B8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rft1Q8C3B8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rft1Q8C3B8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rft1Q8C3B8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rft1Q8C3B8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rft1Q8C3B8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rft1Q8C3B8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rft1Q8C3B8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rft1Q8C3B8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rft1Q8C3B8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rft1Q8C3B8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rft1Q8C3B8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rft1Q8C3B8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rft1Q8C3B8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rft1Q8C3B8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rft1Q8C3B8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rft1Q8C3B8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rft1Q8C3B8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rft1Q8C3B8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rft1Q8C3B8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.63■□□□□ 0.25
Rft1Q8C3B8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.63■□□□□ 0.25
Rft1Q8C3B8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Rft1Q8C3B8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rft1Q8C3B8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rft1Q8C3B8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rft1Q8C3B8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rft1Q8C3B8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rft1Q8C3B8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rft1Q8C3B8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rft1Q8C3B8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rft1Q8C3B8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rft1Q8C3B8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rft1Q8C3B8 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.62■□□□□ 0.25
Rft1Q8C3B8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rft1Q8C3B8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rft1Q8C3B8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.62■□□□□ 0.25
Rft1Q8C3B8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rft1Q8C3B8 Gm43017-201ENSMUST00000198296 752 ntBASIC16.62■□□□□ 0.25
Rft1Q8C3B8 Gm43173-201ENSMUST00000202246 593 ntBASIC16.62■□□□□ 0.25
Rft1Q8C3B8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.62■□□□□ 0.25
Rft1Q8C3B8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.62■□□□□ 0.25
Rft1Q8C3B8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rft1Q8C3B8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rft1Q8C3B8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.62■□□□□ 0.25
Rft1Q8C3B8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rft1Q8C3B8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rft1Q8C3B8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rft1Q8C3B8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
Rft1Q8C3B8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rft1Q8C3B8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rft1Q8C3B8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rft1Q8C3B8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rft1Q8C3B8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rft1Q8C3B8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rft1Q8C3B8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms