Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ptcd1Q8C2E4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ptcd1Q8C2E4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ptcd1Q8C2E4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.29
Ptcd1Q8C2E4 Notumos-201ENSMUST00000151998 2659 ntBASIC23.14■■□□□ 1.29
Ptcd1Q8C2E4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ptcd1Q8C2E4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ptcd1Q8C2E4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ptcd1Q8C2E4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ptcd1Q8C2E4 Gm11643-201ENSMUST00000119578 864 ntBASIC23.13■■□□□ 1.29
Ptcd1Q8C2E4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC23.13■■□□□ 1.29
Ptcd1Q8C2E4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC23.13■■□□□ 1.29
Ptcd1Q8C2E4 Gm37055-201ENSMUST00000191866 133 ntBASIC23.13■■□□□ 1.29
Ptcd1Q8C2E4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ptcd1Q8C2E4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ptcd1Q8C2E4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ptcd1Q8C2E4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC23.13■■□□□ 1.29
Ptcd1Q8C2E4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ptcd1Q8C2E4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptcd1Q8C2E4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptcd1Q8C2E4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptcd1Q8C2E4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptcd1Q8C2E4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptcd1Q8C2E4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptcd1Q8C2E4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ptcd1Q8C2E4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ptcd1Q8C2E4 Gm27032-201ENSMUST00000183124 1116 ntBASIC23.12■■□□□ 1.29
Ptcd1Q8C2E4 Gm18666-201ENSMUST00000190039 958 ntBASIC23.12■■□□□ 1.29
Ptcd1Q8C2E4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ptcd1Q8C2E4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Ptcd1Q8C2E4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ptcd1Q8C2E4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ptcd1Q8C2E4 Gm10698-201ENSMUST00000182663 604 ntBASIC23.11■■□□□ 1.29
Ptcd1Q8C2E4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
Ptcd1Q8C2E4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC23.11■■□□□ 1.29
Ptcd1Q8C2E4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ptcd1Q8C2E4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ptcd1Q8C2E4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ptcd1Q8C2E4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ptcd1Q8C2E4 Nrn1-203ENSMUST00000223611 1443 ntBASIC23.1■■□□□ 1.29
Ptcd1Q8C2E4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ptcd1Q8C2E4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ptcd1Q8C2E4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ptcd1Q8C2E4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC23.1■■□□□ 1.29
Ptcd1Q8C2E4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
Ptcd1Q8C2E4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ptcd1Q8C2E4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ptcd1Q8C2E4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ptcd1Q8C2E4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Ptcd1Q8C2E4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ptcd1Q8C2E4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ptcd1Q8C2E4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ptcd1Q8C2E4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC23.09■■□□□ 1.29
Ptcd1Q8C2E4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ptcd1Q8C2E4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ptcd1Q8C2E4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
Ptcd1Q8C2E4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ptcd1Q8C2E4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ptcd1Q8C2E4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Ptcd1Q8C2E4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ptcd1Q8C2E4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ptcd1Q8C2E4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ptcd1Q8C2E4 Gm11249-201ENSMUST00000117071 859 ntBASIC23.08■■□□□ 1.29
Ptcd1Q8C2E4 Gm9484-201ENSMUST00000195892 1159 ntBASIC23.08■■□□□ 1.29
Ptcd1Q8C2E4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ptcd1Q8C2E4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ptcd1Q8C2E4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Ptcd1Q8C2E4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ptcd1Q8C2E4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Ptcd1Q8C2E4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ptcd1Q8C2E4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ptcd1Q8C2E4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Ptcd1Q8C2E4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC23.07■■□□□ 1.28
Ptcd1Q8C2E4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ptcd1Q8C2E4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Ptcd1Q8C2E4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC23.07■■□□□ 1.28
Ptcd1Q8C2E4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Ptcd1Q8C2E4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ptcd1Q8C2E4 Gm9987-201ENSMUST00000069768 567 ntBASIC23.07■■□□□ 1.28
Ptcd1Q8C2E4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ptcd1Q8C2E4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ptcd1Q8C2E4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ptcd1Q8C2E4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
Ptcd1Q8C2E4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ptcd1Q8C2E4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
Ptcd1Q8C2E4 Golph3-202ENSMUST00000226517 2359 ntBASIC23.06■■□□□ 1.28
Ptcd1Q8C2E4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ptcd1Q8C2E4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ptcd1Q8C2E4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ptcd1Q8C2E4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ptcd1Q8C2E4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Ptcd1Q8C2E4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ptcd1Q8C2E4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ptcd1Q8C2E4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
Ptcd1Q8C2E4 Gm21596-201ENSMUST00000178049 1316 ntBASIC23.06■■□□□ 1.28
Ptcd1Q8C2E4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ptcd1Q8C2E4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ptcd1Q8C2E4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ptcd1Q8C2E4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ptcd1Q8C2E4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms