Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps9d1Q8C190 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vps9d1Q8C190 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps9d1Q8C190 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Vps9d1Q8C190 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps9d1Q8C190 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vps9d1Q8C190 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vps9d1Q8C190 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps9d1Q8C190 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps9d1Q8C190 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Vps9d1Q8C190 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.5■□□□□ 0.39
Vps9d1Q8C190 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps9d1Q8C190 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.5■□□□□ 0.39
Vps9d1Q8C190 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.5■□□□□ 0.39
Vps9d1Q8C190 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vps9d1Q8C190 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps9d1Q8C190 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Vps9d1Q8C190 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Vps9d1Q8C190 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps9d1Q8C190 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps9d1Q8C190 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps9d1Q8C190 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps9d1Q8C190 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vps9d1Q8C190 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.49■□□□□ 0.39
Vps9d1Q8C190 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.49■□□□□ 0.39
Vps9d1Q8C190 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps9d1Q8C190 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps9d1Q8C190 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps9d1Q8C190 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps9d1Q8C190 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Vps9d1Q8C190 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps9d1Q8C190 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps9d1Q8C190 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps9d1Q8C190 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vps9d1Q8C190 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
Vps9d1Q8C190 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps9d1Q8C190 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vps9d1Q8C190 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vps9d1Q8C190 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Vps9d1Q8C190 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps9d1Q8C190 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.48■□□□□ 0.39
Vps9d1Q8C190 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.48■□□□□ 0.39
Vps9d1Q8C190 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps9d1Q8C190 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps9d1Q8C190 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.48■□□□□ 0.39
Vps9d1Q8C190 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vps9d1Q8C190 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps9d1Q8C190 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps9d1Q8C190 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps9d1Q8C190 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps9d1Q8C190 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Vps9d1Q8C190 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.47■□□□□ 0.39
Vps9d1Q8C190 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps9d1Q8C190 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Vps9d1Q8C190 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps9d1Q8C190 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps9d1Q8C190 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Vps9d1Q8C190 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Vps9d1Q8C190 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Vps9d1Q8C190 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps9d1Q8C190 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps9d1Q8C190 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps9d1Q8C190 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps9d1Q8C190 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps9d1Q8C190 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps9d1Q8C190 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps9d1Q8C190 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps9d1Q8C190 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Vps9d1Q8C190 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.46■□□□□ 0.39
Vps9d1Q8C190 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Vps9d1Q8C190 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps9d1Q8C190 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Vps9d1Q8C190 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.46■□□□□ 0.39
Vps9d1Q8C190 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Vps9d1Q8C190 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps9d1Q8C190 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps9d1Q8C190 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps9d1Q8C190 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps9d1Q8C190 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps9d1Q8C190 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps9d1Q8C190 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.45■□□□□ 0.38
Vps9d1Q8C190 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Vps9d1Q8C190 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.45■□□□□ 0.38
Vps9d1Q8C190 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps9d1Q8C190 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps9d1Q8C190 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Vps9d1Q8C190 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps9d1Q8C190 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps9d1Q8C190 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Vps9d1Q8C190 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Vps9d1Q8C190 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps9d1Q8C190 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.44■□□□□ 0.38
Vps9d1Q8C190 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps9d1Q8C190 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps9d1Q8C190 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps9d1Q8C190 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps9d1Q8C190 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps9d1Q8C190 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps9d1Q8C190 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps9d1Q8C190 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms