Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trub1Q8C0D0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trub1Q8C0D0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.39■□□□□ 0.69
Trub1Q8C0D0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
Trub1Q8C0D0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trub1Q8C0D0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trub1Q8C0D0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trub1Q8C0D0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trub1Q8C0D0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trub1Q8C0D0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trub1Q8C0D0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trub1Q8C0D0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trub1Q8C0D0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.38■□□□□ 0.69
Trub1Q8C0D0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trub1Q8C0D0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trub1Q8C0D0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trub1Q8C0D0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trub1Q8C0D0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trub1Q8C0D0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trub1Q8C0D0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trub1Q8C0D0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.37■□□□□ 0.69
Trub1Q8C0D0 Gm13234-201ENSMUST00000120010 747 ntBASIC19.37■□□□□ 0.69
Trub1Q8C0D0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.37■□□□□ 0.69
Trub1Q8C0D0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trub1Q8C0D0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.37■□□□□ 0.69
Trub1Q8C0D0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trub1Q8C0D0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trub1Q8C0D0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trub1Q8C0D0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trub1Q8C0D0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trub1Q8C0D0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.36■□□□□ 0.69
Trub1Q8C0D0 Gm10493-201ENSMUST00000097270 612 ntBASIC19.36■□□□□ 0.69
Trub1Q8C0D0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trub1Q8C0D0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trub1Q8C0D0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trub1Q8C0D0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.36■□□□□ 0.69
Trub1Q8C0D0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trub1Q8C0D0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trub1Q8C0D0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trub1Q8C0D0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trub1Q8C0D0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.35■□□□□ 0.69
Trub1Q8C0D0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trub1Q8C0D0 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.35■□□□□ 0.69
Trub1Q8C0D0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Trub1Q8C0D0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trub1Q8C0D0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trub1Q8C0D0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trub1Q8C0D0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trub1Q8C0D0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trub1Q8C0D0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trub1Q8C0D0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.34■□□□□ 0.69
Trub1Q8C0D0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trub1Q8C0D0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trub1Q8C0D0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trub1Q8C0D0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trub1Q8C0D0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trub1Q8C0D0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trub1Q8C0D0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trub1Q8C0D0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trub1Q8C0D0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trub1Q8C0D0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trub1Q8C0D0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trub1Q8C0D0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trub1Q8C0D0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.33■□□□□ 0.69
Trub1Q8C0D0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trub1Q8C0D0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trub1Q8C0D0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trub1Q8C0D0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trub1Q8C0D0 Gm13534-201ENSMUST00000121169 513 ntBASIC19.33■□□□□ 0.68
Trub1Q8C0D0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.33■□□□□ 0.68
Trub1Q8C0D0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trub1Q8C0D0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trub1Q8C0D0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trub1Q8C0D0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trub1Q8C0D0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trub1Q8C0D0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trub1Q8C0D0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trub1Q8C0D0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.32■□□□□ 0.68
Trub1Q8C0D0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.32■□□□□ 0.68
Trub1Q8C0D0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
Trub1Q8C0D0 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.32■□□□□ 0.68
Trub1Q8C0D0 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.32■□□□□ 0.68
Trub1Q8C0D0 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.32■□□□□ 0.68
Trub1Q8C0D0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trub1Q8C0D0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trub1Q8C0D0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trub1Q8C0D0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trub1Q8C0D0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trub1Q8C0D0 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.31■□□□□ 0.68
Trub1Q8C0D0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trub1Q8C0D0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trub1Q8C0D0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.31■□□□□ 0.68
Trub1Q8C0D0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trub1Q8C0D0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trub1Q8C0D0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.31■□□□□ 0.68
Trub1Q8C0D0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Trub1Q8C0D0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.31■□□□□ 0.68
Trub1Q8C0D0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trub1Q8C0D0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trub1Q8C0D0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms