Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC19.1■□□□□ 0.65
Trim35Q8C006 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim35Q8C006 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.1■□□□□ 0.65
Trim35Q8C006 Gm17917-201ENSMUST00000218561 953 ntBASIC19.1■□□□□ 0.65
Trim35Q8C006 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim35Q8C006 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim35Q8C006 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Trim35Q8C006 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim35Q8C006 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim35Q8C006 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim35Q8C006 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim35Q8C006 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.09■□□□□ 0.65
Trim35Q8C006 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim35Q8C006 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Trim35Q8C006 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim35Q8C006 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trim35Q8C006 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim35Q8C006 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim35Q8C006 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim35Q8C006 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim35Q8C006 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim35Q8C006 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim35Q8C006 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Trim35Q8C006 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim35Q8C006 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim35Q8C006 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim35Q8C006 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Trim35Q8C006 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim35Q8C006 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim35Q8C006 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Trim35Q8C006 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.65
Trim35Q8C006 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim35Q8C006 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim35Q8C006 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim35Q8C006 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.08■□□□□ 0.64
Trim35Q8C006 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.08■□□□□ 0.64
Trim35Q8C006 Gm40848-201ENSMUST00000221998 324 ntBASIC19.08■□□□□ 0.64
Trim35Q8C006 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Trim35Q8C006 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim35Q8C006 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim35Q8C006 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.08■□□□□ 0.64
Trim35Q8C006 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.08■□□□□ 0.64
Trim35Q8C006 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim35Q8C006 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim35Q8C006 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim35Q8C006 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim35Q8C006 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim35Q8C006 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim35Q8C006 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim35Q8C006 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC19.07■□□□□ 0.64
Trim35Q8C006 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.07■□□□□ 0.64
Trim35Q8C006 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim35Q8C006 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim35Q8C006 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC19.07■□□□□ 0.64
Trim35Q8C006 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim35Q8C006 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
Trim35Q8C006 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim35Q8C006 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim35Q8C006 Gm11421-201ENSMUST00000122124 294 ntBASIC19.06■□□□□ 0.64
Trim35Q8C006 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim35Q8C006 Gm29013-201ENSMUST00000187431 237 ntBASIC19.06■□□□□ 0.64
Trim35Q8C006 Gm18351-201ENSMUST00000188646 883 ntBASIC19.06■□□□□ 0.64
Trim35Q8C006 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC19.06■□□□□ 0.64
Trim35Q8C006 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim35Q8C006 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.06■□□□□ 0.64
Trim35Q8C006 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim35Q8C006 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim35Q8C006 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim35Q8C006 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim35Q8C006 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim35Q8C006 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trim35Q8C006 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.05■□□□□ 0.64
Trim35Q8C006 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim35Q8C006 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim35Q8C006 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim35Q8C006 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.05■□□□□ 0.64
Trim35Q8C006 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim35Q8C006 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim35Q8C006 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim35Q8C006 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim35Q8C006 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.05■□□□□ 0.64
Trim35Q8C006 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Trim35Q8C006 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim35Q8C006 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim35Q8C006 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Trim35Q8C006 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim35Q8C006 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim35Q8C006 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Trim35Q8C006 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim35Q8C006 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim35Q8C006 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Trim35Q8C006 Gm42474-201ENSMUST00000201073 505 ntBASIC19.04■□□□□ 0.64
Trim35Q8C006 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim35Q8C006 AC173345.3-201ENSMUST00000221245 1093 ntBASIC19.04■□□□□ 0.64
Trim35Q8C006 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim35Q8C006 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim35Q8C006 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Trim35Q8C006 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim35Q8C006 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim35Q8C006 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms