Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.59■□□□□ 0.25
SprnQ8BWU1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SprnQ8BWU1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SprnQ8BWU1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SprnQ8BWU1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.59■□□□□ 0.25
SprnQ8BWU1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SprnQ8BWU1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SprnQ8BWU1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SprnQ8BWU1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SprnQ8BWU1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
SprnQ8BWU1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SprnQ8BWU1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.58■□□□□ 0.25
SprnQ8BWU1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SprnQ8BWU1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SprnQ8BWU1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SprnQ8BWU1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.58■□□□□ 0.24
SprnQ8BWU1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SprnQ8BWU1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SprnQ8BWU1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SprnQ8BWU1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SprnQ8BWU1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SprnQ8BWU1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.58■□□□□ 0.24
SprnQ8BWU1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SprnQ8BWU1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SprnQ8BWU1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SprnQ8BWU1 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.57■□□□□ 0.24
SprnQ8BWU1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SprnQ8BWU1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
SprnQ8BWU1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SprnQ8BWU1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
SprnQ8BWU1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.57■□□□□ 0.24
SprnQ8BWU1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SprnQ8BWU1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SprnQ8BWU1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SprnQ8BWU1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SprnQ8BWU1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.57■□□□□ 0.24
SprnQ8BWU1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.57■□□□□ 0.24
SprnQ8BWU1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SprnQ8BWU1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SprnQ8BWU1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SprnQ8BWU1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SprnQ8BWU1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SprnQ8BWU1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.56■□□□□ 0.24
SprnQ8BWU1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SprnQ8BWU1 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.56■□□□□ 0.24
SprnQ8BWU1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SprnQ8BWU1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SprnQ8BWU1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SprnQ8BWU1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SprnQ8BWU1 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.56■□□□□ 0.24
SprnQ8BWU1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SprnQ8BWU1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SprnQ8BWU1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SprnQ8BWU1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SprnQ8BWU1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SprnQ8BWU1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SprnQ8BWU1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SprnQ8BWU1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SprnQ8BWU1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SprnQ8BWU1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
SprnQ8BWU1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SprnQ8BWU1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SprnQ8BWU1 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.55■□□□□ 0.24
SprnQ8BWU1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SprnQ8BWU1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SprnQ8BWU1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SprnQ8BWU1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SprnQ8BWU1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SprnQ8BWU1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SprnQ8BWU1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SprnQ8BWU1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SprnQ8BWU1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SprnQ8BWU1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SprnQ8BWU1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SprnQ8BWU1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SprnQ8BWU1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SprnQ8BWU1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SprnQ8BWU1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SprnQ8BWU1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SprnQ8BWU1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SprnQ8BWU1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SprnQ8BWU1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SprnQ8BWU1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SprnQ8BWU1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.53■□□□□ 0.24
SprnQ8BWU1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.53■□□□□ 0.24
SprnQ8BWU1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SprnQ8BWU1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SprnQ8BWU1 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.53■□□□□ 0.24
SprnQ8BWU1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SprnQ8BWU1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SprnQ8BWU1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SprnQ8BWU1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SprnQ8BWU1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SprnQ8BWU1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SprnQ8BWU1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.53■□□□□ 0.24
SprnQ8BWU1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SprnQ8BWU1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SprnQ8BWU1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SprnQ8BWU1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SprnQ8BWU1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms