Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Usp43Q8BUM9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.04■□□□□ 0.64
Usp43Q8BUM9 Gm42778-201ENSMUST00000199644 553 ntBASIC19.04■□□□□ 0.64
Usp43Q8BUM9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp43Q8BUM9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp43Q8BUM9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.04■□□□□ 0.64
Usp43Q8BUM9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Usp43Q8BUM9 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.03■□□□□ 0.64
Usp43Q8BUM9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp43Q8BUM9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.03■□□□□ 0.64
Usp43Q8BUM9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp43Q8BUM9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp43Q8BUM9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp43Q8BUM9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp43Q8BUM9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.03■□□□□ 0.64
Usp43Q8BUM9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp43Q8BUM9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.03■□□□□ 0.64
Usp43Q8BUM9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp43Q8BUM9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp43Q8BUM9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp43Q8BUM9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp43Q8BUM9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp43Q8BUM9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Usp43Q8BUM9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp43Q8BUM9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp43Q8BUM9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp43Q8BUM9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp43Q8BUM9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp43Q8BUM9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp43Q8BUM9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Usp43Q8BUM9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.02■□□□□ 0.64
Usp43Q8BUM9 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.02■□□□□ 0.64
Usp43Q8BUM9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp43Q8BUM9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.02■□□□□ 0.64
Usp43Q8BUM9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.02■□□□□ 0.64
Usp43Q8BUM9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp43Q8BUM9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Usp43Q8BUM9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp43Q8BUM9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp43Q8BUM9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp43Q8BUM9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp43Q8BUM9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Usp43Q8BUM9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp43Q8BUM9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.01■□□□□ 0.63
Usp43Q8BUM9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp43Q8BUM9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp43Q8BUM9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp43Q8BUM9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp43Q8BUM9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Usp43Q8BUM9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp43Q8BUM9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp43Q8BUM9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Usp43Q8BUM9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp43Q8BUM9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Usp43Q8BUM9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Usp43Q8BUM9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp43Q8BUM9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp43Q8BUM9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp43Q8BUM9 Gm5112-201ENSMUST00000204407 2368 ntBASIC19■□□□□ 0.63
Usp43Q8BUM9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp43Q8BUM9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Usp43Q8BUM9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp43Q8BUM9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Usp43Q8BUM9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Usp43Q8BUM9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19■□□□□ 0.63
Usp43Q8BUM9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Usp43Q8BUM9 Gm6627-201ENSMUST00000218299 2386 ntBASIC19■□□□□ 0.63
Usp43Q8BUM9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Usp43Q8BUM9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp43Q8BUM9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp43Q8BUM9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp43Q8BUM9 Gm5874-201ENSMUST00000096101 508 ntBASIC18.99■□□□□ 0.63
Usp43Q8BUM9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp43Q8BUM9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp43Q8BUM9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Usp43Q8BUM9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp43Q8BUM9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Usp43Q8BUM9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp43Q8BUM9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp43Q8BUM9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp43Q8BUM9 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.98■□□□□ 0.63
Usp43Q8BUM9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.98■□□□□ 0.63
Usp43Q8BUM9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.98■□□□□ 0.63
Usp43Q8BUM9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.98■□□□□ 0.63
Usp43Q8BUM9 Gm10033-202ENSMUST00000211874 928 ntBASIC18.98■□□□□ 0.63
Usp43Q8BUM9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp43Q8BUM9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp43Q8BUM9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp43Q8BUM9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp43Q8BUM9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Usp43Q8BUM9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp43Q8BUM9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp43Q8BUM9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.97■□□□□ 0.63
Usp43Q8BUM9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp43Q8BUM9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.97■□□□□ 0.63
Usp43Q8BUM9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.97■□□□□ 0.63
Usp43Q8BUM9 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.97■□□□□ 0.63
Usp43Q8BUM9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp43Q8BUM9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp43Q8BUM9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms