Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smco3Q8BQM7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.47■□□□□ 0.07
Smco3Q8BQM7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smco3Q8BQM7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smco3Q8BQM7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Smco3Q8BQM7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smco3Q8BQM7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Smco3Q8BQM7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Smco3Q8BQM7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smco3Q8BQM7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smco3Q8BQM7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Smco3Q8BQM7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Smco3Q8BQM7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Smco3Q8BQM7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smco3Q8BQM7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Smco3Q8BQM7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smco3Q8BQM7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smco3Q8BQM7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.46■□□□□ 0.07
Smco3Q8BQM7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smco3Q8BQM7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smco3Q8BQM7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Smco3Q8BQM7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Smco3Q8BQM7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.06
Smco3Q8BQM7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smco3Q8BQM7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smco3Q8BQM7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Smco3Q8BQM7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Smco3Q8BQM7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.45■□□□□ 0.06
Smco3Q8BQM7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smco3Q8BQM7 Gm13238-201ENSMUST00000117655 780 ntBASIC15.45■□□□□ 0.06
Smco3Q8BQM7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Smco3Q8BQM7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Smco3Q8BQM7 Gm43530-201ENSMUST00000195920 274 ntBASIC15.45■□□□□ 0.06
Smco3Q8BQM7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smco3Q8BQM7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smco3Q8BQM7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
Smco3Q8BQM7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Smco3Q8BQM7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smco3Q8BQM7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smco3Q8BQM7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smco3Q8BQM7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Gm43566-201ENSMUST00000196851 808 ntBASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco3Q8BQM7 AA386476-201ENSMUST00000098781 1665 ntBASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Smco3Q8BQM7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Smco3Q8BQM7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Smco3Q8BQM7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smco3Q8BQM7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Smco3Q8BQM7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Smco3Q8BQM7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smco3Q8BQM7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smco3Q8BQM7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smco3Q8BQM7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smco3Q8BQM7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smco3Q8BQM7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smco3Q8BQM7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smco3Q8BQM7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smco3Q8BQM7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smco3Q8BQM7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smco3Q8BQM7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smco3Q8BQM7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smco3Q8BQM7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.43■□□□□ 0.06
Smco3Q8BQM7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smco3Q8BQM7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco3Q8BQM7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco3Q8BQM7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco3Q8BQM7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Smco3Q8BQM7 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.42■□□□□ 0.06
Smco3Q8BQM7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco3Q8BQM7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco3Q8BQM7 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco3Q8BQM7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smco3Q8BQM7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco3Q8BQM7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco3Q8BQM7 Etf1-202ENSMUST00000180351 108 ntBASIC15.42■□□□□ 0.06
Smco3Q8BQM7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco3Q8BQM7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco3Q8BQM7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco3Q8BQM7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco3Q8BQM7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smco3Q8BQM7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco3Q8BQM7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms