Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VmacQ8BP01 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VmacQ8BP01 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.66■■□□□ 1.06
VmacQ8BP01 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
VmacQ8BP01 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VmacQ8BP01 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VmacQ8BP01 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
VmacQ8BP01 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VmacQ8BP01 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VmacQ8BP01 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VmacQ8BP01 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.65■■□□□ 1.06
VmacQ8BP01 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
VmacQ8BP01 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VmacQ8BP01 Gm6420-201ENSMUST00000193885 723 ntBASIC21.65■■□□□ 1.06
VmacQ8BP01 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.65■■□□□ 1.06
VmacQ8BP01 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.65■■□□□ 1.06
VmacQ8BP01 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
VmacQ8BP01 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VmacQ8BP01 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VmacQ8BP01 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VmacQ8BP01 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.65■■□□□ 1.06
VmacQ8BP01 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
VmacQ8BP01 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
VmacQ8BP01 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
VmacQ8BP01 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
VmacQ8BP01 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VmacQ8BP01 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
VmacQ8BP01 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.64■■□□□ 1.05
VmacQ8BP01 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
VmacQ8BP01 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.64■■□□□ 1.05
VmacQ8BP01 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VmacQ8BP01 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
VmacQ8BP01 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VmacQ8BP01 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VmacQ8BP01 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VmacQ8BP01 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VmacQ8BP01 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VmacQ8BP01 Gm42569-201ENSMUST00000200539 472 ntBASIC21.63■■□□□ 1.05
VmacQ8BP01 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VmacQ8BP01 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VmacQ8BP01 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VmacQ8BP01 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VmacQ8BP01 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VmacQ8BP01 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VmacQ8BP01 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VmacQ8BP01 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
VmacQ8BP01 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VmacQ8BP01 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.62■■□□□ 1.05
VmacQ8BP01 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VmacQ8BP01 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VmacQ8BP01 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VmacQ8BP01 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VmacQ8BP01 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
VmacQ8BP01 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VmacQ8BP01 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VmacQ8BP01 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
VmacQ8BP01 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VmacQ8BP01 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VmacQ8BP01 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VmacQ8BP01 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VmacQ8BP01 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VmacQ8BP01 Nespas-201ENSMUST00000143738 1083 ntBASIC21.61■■□□□ 1.05
VmacQ8BP01 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
VmacQ8BP01 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
VmacQ8BP01 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VmacQ8BP01 Golph3-205ENSMUST00000228671 2842 ntBASIC21.61■■□□□ 1.05
VmacQ8BP01 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VmacQ8BP01 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VmacQ8BP01 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VmacQ8BP01 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VmacQ8BP01 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
VmacQ8BP01 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
VmacQ8BP01 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
VmacQ8BP01 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
VmacQ8BP01 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VmacQ8BP01 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VmacQ8BP01 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VmacQ8BP01 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VmacQ8BP01 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VmacQ8BP01 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VmacQ8BP01 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VmacQ8BP01 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VmacQ8BP01 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.59■■□□□ 1.05
VmacQ8BP01 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VmacQ8BP01 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VmacQ8BP01 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
VmacQ8BP01 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
VmacQ8BP01 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VmacQ8BP01 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VmacQ8BP01 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.58■■□□□ 1.05
VmacQ8BP01 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.58■■□□□ 1.05
VmacQ8BP01 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VmacQ8BP01 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VmacQ8BP01 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
VmacQ8BP01 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VmacQ8BP01 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.58■■□□□ 1.05
VmacQ8BP01 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VmacQ8BP01 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
VmacQ8BP01 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
VmacQ8BP01 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms