Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc40Q8BI79 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc40Q8BI79 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc40Q8BI79 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc40Q8BI79 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc40Q8BI79 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc40Q8BI79 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc40Q8BI79 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc40Q8BI79 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc40Q8BI79 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc40Q8BI79 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc40Q8BI79 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc40Q8BI79 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc40Q8BI79 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc40Q8BI79 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc40Q8BI79 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Ccdc40Q8BI79 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc40Q8BI79 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc40Q8BI79 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc40Q8BI79 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc40Q8BI79 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc40Q8BI79 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc40Q8BI79 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.43■□□□□ 0.7
Ccdc40Q8BI79 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc40Q8BI79 Gm43060-201ENSMUST00000200621 289 ntBASIC19.43■□□□□ 0.7
Ccdc40Q8BI79 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc40Q8BI79 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc40Q8BI79 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc40Q8BI79 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc40Q8BI79 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc40Q8BI79 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc40Q8BI79 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.42■□□□□ 0.7
Ccdc40Q8BI79 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Ccdc40Q8BI79 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Ccdc40Q8BI79 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.42■□□□□ 0.7
Ccdc40Q8BI79 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.42■□□□□ 0.7
Ccdc40Q8BI79 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc40Q8BI79 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc40Q8BI79 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.42■□□□□ 0.7
Ccdc40Q8BI79 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc40Q8BI79 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Ccdc40Q8BI79 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc40Q8BI79 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc40Q8BI79 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc40Q8BI79 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ccdc40Q8BI79 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc40Q8BI79 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc40Q8BI79 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc40Q8BI79 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc40Q8BI79 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccdc40Q8BI79 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc40Q8BI79 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc40Q8BI79 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc40Q8BI79 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc40Q8BI79 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.41■□□□□ 0.7
Ccdc40Q8BI79 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc40Q8BI79 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc40Q8BI79 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccdc40Q8BI79 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc40Q8BI79 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc40Q8BI79 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc40Q8BI79 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc40Q8BI79 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc40Q8BI79 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc40Q8BI79 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc40Q8BI79 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc40Q8BI79 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.4■□□□□ 0.7
Ccdc40Q8BI79 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc40Q8BI79 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.4■□□□□ 0.7
Ccdc40Q8BI79 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc40Q8BI79 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc40Q8BI79 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc40Q8BI79 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc40Q8BI79 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.4■□□□□ 0.7
Ccdc40Q8BI79 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.4■□□□□ 0.7
Ccdc40Q8BI79 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc40Q8BI79 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc40Q8BI79 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc40Q8BI79 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc40Q8BI79 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc40Q8BI79 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc40Q8BI79 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc40Q8BI79 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc40Q8BI79 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc40Q8BI79 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.39■□□□□ 0.69
Ccdc40Q8BI79 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc40Q8BI79 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc40Q8BI79 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc40Q8BI79 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc40Q8BI79 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc40Q8BI79 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.38■□□□□ 0.69
Ccdc40Q8BI79 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.38■□□□□ 0.69
Ccdc40Q8BI79 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc40Q8BI79 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Ccdc40Q8BI79 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc40Q8BI79 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc40Q8BI79 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc40Q8BI79 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc40Q8BI79 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc40Q8BI79 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms