Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn3Q8BHH8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn3Q8BHH8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn3Q8BHH8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn3Q8BHH8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn3Q8BHH8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn3Q8BHH8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn3Q8BHH8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn3Q8BHH8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn3Q8BHH8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn3Q8BHH8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.52■□□□□ 0.4
Clrn3Q8BHH8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn3Q8BHH8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn3Q8BHH8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn3Q8BHH8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn3Q8BHH8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.52■□□□□ 0.39
Clrn3Q8BHH8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Clrn3Q8BHH8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clrn3Q8BHH8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn3Q8BHH8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn3Q8BHH8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn3Q8BHH8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn3Q8BHH8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn3Q8BHH8 Gm7860-201ENSMUST00000121190 879 ntBASIC17.51■□□□□ 0.39
Clrn3Q8BHH8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn3Q8BHH8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn3Q8BHH8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn3Q8BHH8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn3Q8BHH8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn3Q8BHH8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn3Q8BHH8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn3Q8BHH8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn3Q8BHH8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn3Q8BHH8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn3Q8BHH8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn3Q8BHH8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.5■□□□□ 0.39
Clrn3Q8BHH8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn3Q8BHH8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.5■□□□□ 0.39
Clrn3Q8BHH8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn3Q8BHH8 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.5■□□□□ 0.39
Clrn3Q8BHH8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn3Q8BHH8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn3Q8BHH8 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.5■□□□□ 0.39
Clrn3Q8BHH8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn3Q8BHH8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Clrn3Q8BHH8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn3Q8BHH8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.49■□□□□ 0.39
Clrn3Q8BHH8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.49■□□□□ 0.39
Clrn3Q8BHH8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn3Q8BHH8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn3Q8BHH8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.49■□□□□ 0.39
Clrn3Q8BHH8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn3Q8BHH8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Clrn3Q8BHH8 Gm10493-201ENSMUST00000097270 612 ntBASIC17.49■□□□□ 0.39
Clrn3Q8BHH8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Clrn3Q8BHH8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn3Q8BHH8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn3Q8BHH8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn3Q8BHH8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn3Q8BHH8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn3Q8BHH8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn3Q8BHH8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn3Q8BHH8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn3Q8BHH8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn3Q8BHH8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn3Q8BHH8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn3Q8BHH8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.48■□□□□ 0.39
Clrn3Q8BHH8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.48■□□□□ 0.39
Clrn3Q8BHH8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.48■□□□□ 0.39
Clrn3Q8BHH8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn3Q8BHH8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn3Q8BHH8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.48■□□□□ 0.39
Clrn3Q8BHH8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Clrn3Q8BHH8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn3Q8BHH8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn3Q8BHH8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.48■□□□□ 0.39
Clrn3Q8BHH8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn3Q8BHH8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.48■□□□□ 0.39
Clrn3Q8BHH8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Clrn3Q8BHH8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn3Q8BHH8 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.47■□□□□ 0.39
Clrn3Q8BHH8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn3Q8BHH8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn3Q8BHH8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn3Q8BHH8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn3Q8BHH8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn3Q8BHH8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn3Q8BHH8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn3Q8BHH8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Clrn3Q8BHH8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn3Q8BHH8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn3Q8BHH8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.47■□□□□ 0.39
Clrn3Q8BHH8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.47■□□□□ 0.39
Clrn3Q8BHH8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Clrn3Q8BHH8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Clrn3Q8BHH8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn3Q8BHH8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn3Q8BHH8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clrn3Q8BHH8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clrn3Q8BHH8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms