Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Depdc1bQ8BH88 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Depdc1bQ8BH88 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Depdc1bQ8BH88 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Depdc1bQ8BH88 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Depdc1bQ8BH88 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Depdc1bQ8BH88 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.34■□□□□ 0.85
Depdc1bQ8BH88 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Depdc1bQ8BH88 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.34■□□□□ 0.85
Depdc1bQ8BH88 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Depdc1bQ8BH88 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Depdc1bQ8BH88 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Depdc1bQ8BH88 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Depdc1bQ8BH88 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Depdc1bQ8BH88 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.34■□□□□ 0.85
Depdc1bQ8BH88 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Depdc1bQ8BH88 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.33■□□□□ 0.85
Depdc1bQ8BH88 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Depdc1bQ8BH88 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Depdc1bQ8BH88 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Depdc1bQ8BH88 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Depdc1bQ8BH88 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Depdc1bQ8BH88 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Depdc1bQ8BH88 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.33■□□□□ 0.85
Depdc1bQ8BH88 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.33■□□□□ 0.85
Depdc1bQ8BH88 Gm9988-201ENSMUST00000069786 435 ntBASIC20.33■□□□□ 0.85
Depdc1bQ8BH88 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Depdc1bQ8BH88 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Depdc1bQ8BH88 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Depdc1bQ8BH88 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Depdc1bQ8BH88 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Depdc1bQ8BH88 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Depdc1bQ8BH88 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Depdc1bQ8BH88 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.32■□□□□ 0.84
Depdc1bQ8BH88 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Depdc1bQ8BH88 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Depdc1bQ8BH88 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Depdc1bQ8BH88 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Depdc1bQ8BH88 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.32■□□□□ 0.84
Depdc1bQ8BH88 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1bQ8BH88 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1bQ8BH88 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Depdc1bQ8BH88 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1bQ8BH88 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1bQ8BH88 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1bQ8BH88 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Depdc1bQ8BH88 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1bQ8BH88 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1bQ8BH88 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.31■□□□□ 0.84
Depdc1bQ8BH88 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1bQ8BH88 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1bQ8BH88 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1bQ8BH88 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Depdc1bQ8BH88 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Depdc1bQ8BH88 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1bQ8BH88 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1bQ8BH88 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Depdc1bQ8BH88 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Depdc1bQ8BH88 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Depdc1bQ8BH88 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Depdc1bQ8BH88 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Depdc1bQ8BH88 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Depdc1bQ8BH88 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.3■□□□□ 0.84
Depdc1bQ8BH88 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.3■□□□□ 0.84
Depdc1bQ8BH88 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Depdc1bQ8BH88 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Depdc1bQ8BH88 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Depdc1bQ8BH88 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Depdc1bQ8BH88 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Depdc1bQ8BH88 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Depdc1bQ8BH88 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1bQ8BH88 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1bQ8BH88 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1bQ8BH88 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1bQ8BH88 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1bQ8BH88 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1bQ8BH88 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1bQ8BH88 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1bQ8BH88 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.29■□□□□ 0.84
Depdc1bQ8BH88 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1bQ8BH88 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.29■□□□□ 0.84
Depdc1bQ8BH88 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1bQ8BH88 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.29■□□□□ 0.84
Depdc1bQ8BH88 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1bQ8BH88 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1bQ8BH88 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Depdc1bQ8BH88 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1bQ8BH88 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Depdc1bQ8BH88 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Depdc1bQ8BH88 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms