Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim65Q8BFW4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim65Q8BFW4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim65Q8BFW4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim65Q8BFW4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim65Q8BFW4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim65Q8BFW4 Gm13146-201ENSMUST00000118508 780 ntBASIC20.11■□□□□ 0.81
Trim65Q8BFW4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.11■□□□□ 0.81
Trim65Q8BFW4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Trim65Q8BFW4 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.11■□□□□ 0.81
Trim65Q8BFW4 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.11■□□□□ 0.81
Trim65Q8BFW4 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.11■□□□□ 0.81
Trim65Q8BFW4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.11■□□□□ 0.81
Trim65Q8BFW4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim65Q8BFW4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim65Q8BFW4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim65Q8BFW4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim65Q8BFW4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trim65Q8BFW4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim65Q8BFW4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trim65Q8BFW4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim65Q8BFW4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim65Q8BFW4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim65Q8BFW4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim65Q8BFW4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim65Q8BFW4 Gm42778-201ENSMUST00000199644 553 ntBASIC20.09■□□□□ 0.81
Trim65Q8BFW4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim65Q8BFW4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim65Q8BFW4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim65Q8BFW4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trim65Q8BFW4 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim65Q8BFW4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim65Q8BFW4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim65Q8BFW4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trim65Q8BFW4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.08■□□□□ 0.81
Trim65Q8BFW4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim65Q8BFW4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim65Q8BFW4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.08■□□□□ 0.8
Trim65Q8BFW4 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.08■□□□□ 0.8
Trim65Q8BFW4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim65Q8BFW4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim65Q8BFW4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
Trim65Q8BFW4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim65Q8BFW4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim65Q8BFW4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim65Q8BFW4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.07■□□□□ 0.8
Trim65Q8BFW4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim65Q8BFW4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim65Q8BFW4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim65Q8BFW4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim65Q8BFW4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim65Q8BFW4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim65Q8BFW4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim65Q8BFW4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim65Q8BFW4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim65Q8BFW4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim65Q8BFW4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim65Q8BFW4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim65Q8BFW4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim65Q8BFW4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim65Q8BFW4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim65Q8BFW4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim65Q8BFW4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim65Q8BFW4 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.05■□□□□ 0.8
Trim65Q8BFW4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim65Q8BFW4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trim65Q8BFW4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim65Q8BFW4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim65Q8BFW4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim65Q8BFW4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trim65Q8BFW4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim65Q8BFW4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim65Q8BFW4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trim65Q8BFW4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Trim65Q8BFW4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim65Q8BFW4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim65Q8BFW4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim65Q8BFW4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim65Q8BFW4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms