Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nucks1Q80XU3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nucks1Q80XU3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.03■□□□□ 0.8
Nucks1Q80XU3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
Nucks1Q80XU3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nucks1Q80XU3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.03■□□□□ 0.8
Nucks1Q80XU3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Nucks1Q80XU3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nucks1Q80XU3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Nucks1Q80XU3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Nucks1Q80XU3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nucks1Q80XU3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nucks1Q80XU3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nucks1Q80XU3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nucks1Q80XU3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nucks1Q80XU3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nucks1Q80XU3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Nucks1Q80XU3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nucks1Q80XU3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Nucks1Q80XU3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nucks1Q80XU3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.02■□□□□ 0.8
Nucks1Q80XU3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Nucks1Q80XU3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.02■□□□□ 0.79
Nucks1Q80XU3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Nucks1Q80XU3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nucks1Q80XU3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nucks1Q80XU3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nucks1Q80XU3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Nucks1Q80XU3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nucks1Q80XU3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Nucks1Q80XU3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nucks1Q80XU3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nucks1Q80XU3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Nucks1Q80XU3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nucks1Q80XU3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nucks1Q80XU3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nucks1Q80XU3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nucks1Q80XU3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Nucks1Q80XU3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nucks1Q80XU3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nucks1Q80XU3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nucks1Q80XU3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nucks1Q80XU3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20■□□□□ 0.79
Nucks1Q80XU3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nucks1Q80XU3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nucks1Q80XU3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nucks1Q80XU3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Nucks1Q80XU3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Nucks1Q80XU3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nucks1Q80XU3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20■□□□□ 0.79
Nucks1Q80XU3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Nucks1Q80XU3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nucks1Q80XU3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nucks1Q80XU3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Nucks1Q80XU3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nucks1Q80XU3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nucks1Q80XU3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Nucks1Q80XU3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nucks1Q80XU3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nucks1Q80XU3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nucks1Q80XU3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nucks1Q80XU3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nucks1Q80XU3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nucks1Q80XU3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nucks1Q80XU3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nucks1Q80XU3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nucks1Q80XU3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nucks1Q80XU3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nucks1Q80XU3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nucks1Q80XU3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nucks1Q80XU3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Nucks1Q80XU3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nucks1Q80XU3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nucks1Q80XU3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nucks1Q80XU3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nucks1Q80XU3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.97■□□□□ 0.79
Nucks1Q80XU3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms