Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf40bQ80W14 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf40bQ80W14 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf40bQ80W14 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf40bQ80W14 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf40bQ80W14 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Prpf40bQ80W14 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf40bQ80W14 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.61■■□□□ 1.05
Prpf40bQ80W14 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Prpf40bQ80W14 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prpf40bQ80W14 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prpf40bQ80W14 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Prpf40bQ80W14 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prpf40bQ80W14 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Prpf40bQ80W14 Gm26524-201ENSMUST00000192339 390 ntBASIC21.6■■□□□ 1.05
Prpf40bQ80W14 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prpf40bQ80W14 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Prpf40bQ80W14 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Prpf40bQ80W14 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Prpf40bQ80W14 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Prpf40bQ80W14 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Prpf40bQ80W14 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.59■■□□□ 1.05
Prpf40bQ80W14 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Prpf40bQ80W14 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Prpf40bQ80W14 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.58■■□□□ 1.05
Prpf40bQ80W14 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Prpf40bQ80W14 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.58■■□□□ 1.05
Prpf40bQ80W14 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Prpf40bQ80W14 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Prpf40bQ80W14 Rab3c-203ENSMUST00000224180 967 ntBASIC21.58■■□□□ 1.05
Prpf40bQ80W14 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Prpf40bQ80W14 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Prpf40bQ80W14 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Prpf40bQ80W14 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Prpf40bQ80W14 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Prpf40bQ80W14 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.57■■□□□ 1.04
Prpf40bQ80W14 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Prpf40bQ80W14 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Prpf40bQ80W14 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Prpf40bQ80W14 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Prpf40bQ80W14 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Prpf40bQ80W14 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Prpf40bQ80W14 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Prpf40bQ80W14 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Prpf40bQ80W14 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prpf40bQ80W14 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prpf40bQ80W14 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
Prpf40bQ80W14 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Prpf40bQ80W14 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.56■■□□□ 1.04
Prpf40bQ80W14 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prpf40bQ80W14 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Prpf40bQ80W14 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf40bQ80W14 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf40bQ80W14 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf40bQ80W14 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf40bQ80W14 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.55■■□□□ 1.04
Prpf40bQ80W14 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf40bQ80W14 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf40bQ80W14 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf40bQ80W14 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf40bQ80W14 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Prpf40bQ80W14 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Prpf40bQ80W14 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf40bQ80W14 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf40bQ80W14 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf40bQ80W14 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf40bQ80W14 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf40bQ80W14 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf40bQ80W14 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf40bQ80W14 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Prpf40bQ80W14 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Prpf40bQ80W14 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf40bQ80W14 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.54■■□□□ 1.04
Prpf40bQ80W14 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf40bQ80W14 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf40bQ80W14 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf40bQ80W14 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf40bQ80W14 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Prpf40bQ80W14 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Prpf40bQ80W14 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf40bQ80W14 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf40bQ80W14 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf40bQ80W14 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Prpf40bQ80W14 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf40bQ80W14 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf40bQ80W14 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf40bQ80W14 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Prpf40bQ80W14 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Prpf40bQ80W14 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf40bQ80W14 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf40bQ80W14 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf40bQ80W14 Gm5643-201ENSMUST00000117081 966 ntBASIC21.52■■□□□ 1.04
Prpf40bQ80W14 Gm715-201ENSMUST00000117865 831 ntBASIC21.52■■□□□ 1.04
Prpf40bQ80W14 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf40bQ80W14 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.52■■□□□ 1.04
Prpf40bQ80W14 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.52■■□□□ 1.04
Prpf40bQ80W14 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Prpf40bQ80W14 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.52■■□□□ 1.04
Prpf40bQ80W14 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.04
Prpf40bQ80W14 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms