Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ush1gQ80T11 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ush1gQ80T11 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ush1gQ80T11 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Ush1gQ80T11 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.51■□□□□ 0.87
Ush1gQ80T11 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ush1gQ80T11 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ush1gQ80T11 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ush1gQ80T11 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ush1gQ80T11 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ush1gQ80T11 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ush1gQ80T11 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ush1gQ80T11 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ush1gQ80T11 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.51■□□□□ 0.87
Ush1gQ80T11 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ush1gQ80T11 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ush1gQ80T11 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ush1gQ80T11 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ush1gQ80T11 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ush1gQ80T11 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ush1gQ80T11 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ush1gQ80T11 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ush1gQ80T11 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ush1gQ80T11 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ush1gQ80T11 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ush1gQ80T11 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.5■□□□□ 0.87
Ush1gQ80T11 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.5■□□□□ 0.87
Ush1gQ80T11 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ush1gQ80T11 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ush1gQ80T11 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ush1gQ80T11 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ush1gQ80T11 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ush1gQ80T11 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ush1gQ80T11 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Ush1gQ80T11 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ush1gQ80T11 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ush1gQ80T11 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.49■□□□□ 0.87
Ush1gQ80T11 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ush1gQ80T11 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.49■□□□□ 0.87
Ush1gQ80T11 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ush1gQ80T11 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ush1gQ80T11 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ush1gQ80T11 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
Ush1gQ80T11 Golph3-202ENSMUST00000226517 2359 ntBASIC20.49■□□□□ 0.87
Ush1gQ80T11 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ush1gQ80T11 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ush1gQ80T11 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ush1gQ80T11 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ush1gQ80T11 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.48■□□□□ 0.87
Ush1gQ80T11 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.48■□□□□ 0.87
Ush1gQ80T11 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.48■□□□□ 0.87
Ush1gQ80T11 Mir6982-201ENSMUST00000184354 68 ntBASIC20.48■□□□□ 0.87
Ush1gQ80T11 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Ush1gQ80T11 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.48■□□□□ 0.87
Ush1gQ80T11 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ush1gQ80T11 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ush1gQ80T11 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ush1gQ80T11 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ush1gQ80T11 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ush1gQ80T11 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ush1gQ80T11 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ush1gQ80T11 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ush1gQ80T11 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ush1gQ80T11 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ush1gQ80T11 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ush1gQ80T11 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.47■□□□□ 0.87
Ush1gQ80T11 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Ush1gQ80T11 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ush1gQ80T11 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ush1gQ80T11 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ush1gQ80T11 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ush1gQ80T11 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ush1gQ80T11 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ush1gQ80T11 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Ush1gQ80T11 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ush1gQ80T11 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.46■□□□□ 0.87
Ush1gQ80T11 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.46■□□□□ 0.87
Ush1gQ80T11 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ush1gQ80T11 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Ush1gQ80T11 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ush1gQ80T11 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ush1gQ80T11 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.45■□□□□ 0.86
Ush1gQ80T11 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.45■□□□□ 0.86
Ush1gQ80T11 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ush1gQ80T11 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ush1gQ80T11 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ush1gQ80T11 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ush1gQ80T11 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ush1gQ80T11 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ush1gQ80T11 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ush1gQ80T11 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ush1gQ80T11 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ush1gQ80T11 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ush1gQ80T11 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ush1gQ80T11 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ush1gQ80T11 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ush1gQ80T11 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ush1gQ80T11 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ush1gQ80T11 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.44■□□□□ 0.86
Ush1gQ80T11 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms