Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf38bQ80SY5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf38bQ80SY5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf38bQ80SY5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf38bQ80SY5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf38bQ80SY5 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf38bQ80SY5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf38bQ80SY5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf38bQ80SY5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Prpf38bQ80SY5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf38bQ80SY5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Prpf38bQ80SY5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf38bQ80SY5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Prpf38bQ80SY5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.52■□□□□ 0.72
Prpf38bQ80SY5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf38bQ80SY5 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf38bQ80SY5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Prpf38bQ80SY5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prpf38bQ80SY5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Prpf38bQ80SY5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.52■□□□□ 0.71
Prpf38bQ80SY5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Prpf38bQ80SY5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
Prpf38bQ80SY5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Prpf38bQ80SY5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf38bQ80SY5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf38bQ80SY5 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf38bQ80SY5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf38bQ80SY5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.51■□□□□ 0.71
Prpf38bQ80SY5 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prpf38bQ80SY5 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.51■□□□□ 0.71
Prpf38bQ80SY5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf38bQ80SY5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Prpf38bQ80SY5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf38bQ80SY5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.5■□□□□ 0.71
Prpf38bQ80SY5 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf38bQ80SY5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf38bQ80SY5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Prpf38bQ80SY5 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Prpf38bQ80SY5 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf38bQ80SY5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Prpf38bQ80SY5 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Gm715-201ENSMUST00000117865 831 ntBASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Prpf38bQ80SY5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf38bQ80SY5 Golph3-205ENSMUST00000228671 2842 ntBASIC19.48■□□□□ 0.71
Prpf38bQ80SY5 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf38bQ80SY5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf38bQ80SY5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf38bQ80SY5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf38bQ80SY5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf38bQ80SY5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Prpf38bQ80SY5 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf38bQ80SY5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf38bQ80SY5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf38bQ80SY5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf38bQ80SY5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.47■□□□□ 0.71
Prpf38bQ80SY5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf38bQ80SY5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf38bQ80SY5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf38bQ80SY5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf38bQ80SY5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf38bQ80SY5 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf38bQ80SY5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf38bQ80SY5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf38bQ80SY5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Prpf38bQ80SY5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.46■□□□□ 0.71
Prpf38bQ80SY5 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.46■□□□□ 0.71
Prpf38bQ80SY5 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf38bQ80SY5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Prpf38bQ80SY5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf38bQ80SY5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf38bQ80SY5 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf38bQ80SY5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Prpf38bQ80SY5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf38bQ80SY5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf38bQ80SY5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf38bQ80SY5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.45■□□□□ 0.7
Prpf38bQ80SY5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38bQ80SY5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38bQ80SY5 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf38bQ80SY5 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.45■□□□□ 0.7
Prpf38bQ80SY5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms