Protein–RNA interactions for Protein: Q7TPM3

Trim17, E3 ubiquitin-protein ligase TRIM17, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17Q7TPM3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim17Q7TPM3 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.4■□□□□ 0.7
Trim17Q7TPM3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim17Q7TPM3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim17Q7TPM3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim17Q7TPM3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.39■□□□□ 0.7
Trim17Q7TPM3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.39■□□□□ 0.7
Trim17Q7TPM3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim17Q7TPM3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.39■□□□□ 0.69
Trim17Q7TPM3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim17Q7TPM3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim17Q7TPM3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim17Q7TPM3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim17Q7TPM3 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.39■□□□□ 0.69
Trim17Q7TPM3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim17Q7TPM3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim17Q7TPM3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
Trim17Q7TPM3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim17Q7TPM3 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.39■□□□□ 0.69
Trim17Q7TPM3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim17Q7TPM3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trim17Q7TPM3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Trim17Q7TPM3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.38■□□□□ 0.69
Trim17Q7TPM3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.38■□□□□ 0.69
Trim17Q7TPM3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Trim17Q7TPM3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trim17Q7TPM3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim17Q7TPM3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim17Q7TPM3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim17Q7TPM3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trim17Q7TPM3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim17Q7TPM3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.38■□□□□ 0.69
Trim17Q7TPM3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim17Q7TPM3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim17Q7TPM3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim17Q7TPM3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim17Q7TPM3 Gm5643-201ENSMUST00000117081 966 ntBASIC19.37■□□□□ 0.69
Trim17Q7TPM3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim17Q7TPM3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Trim17Q7TPM3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim17Q7TPM3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim17Q7TPM3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim17Q7TPM3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trim17Q7TPM3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim17Q7TPM3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim17Q7TPM3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim17Q7TPM3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.36■□□□□ 0.69
Trim17Q7TPM3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trim17Q7TPM3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim17Q7TPM3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trim17Q7TPM3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim17Q7TPM3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim17Q7TPM3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trim17Q7TPM3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.35■□□□□ 0.69
Trim17Q7TPM3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim17Q7TPM3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trim17Q7TPM3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim17Q7TPM3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim17Q7TPM3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim17Q7TPM3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.35■□□□□ 0.69
Trim17Q7TPM3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim17Q7TPM3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trim17Q7TPM3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim17Q7TPM3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim17Q7TPM3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim17Q7TPM3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim17Q7TPM3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim17Q7TPM3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim17Q7TPM3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim17Q7TPM3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim17Q7TPM3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trim17Q7TPM3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim17Q7TPM3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trim17Q7TPM3 Gm2559-201ENSMUST00000201323 363 ntBASIC19.34■□□□□ 0.69
Trim17Q7TPM3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim17Q7TPM3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim17Q7TPM3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim17Q7TPM3 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.34■□□□□ 0.69
Trim17Q7TPM3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
Trim17Q7TPM3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim17Q7TPM3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim17Q7TPM3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim17Q7TPM3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Trim17Q7TPM3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Trim17Q7TPM3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Trim17Q7TPM3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Trim17Q7TPM3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim17Q7TPM3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trim17Q7TPM3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim17Q7TPM3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim17Q7TPM3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trim17Q7TPM3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim17Q7TPM3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim17Q7TPM3 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.32■□□□□ 0.68
Trim17Q7TPM3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.32■□□□□ 0.68
Trim17Q7TPM3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim17Q7TPM3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim17Q7TPM3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim17Q7TPM3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim17Q7TPM3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms