Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Ddx55Q6ZPL9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx55Q6ZPL9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx55Q6ZPL9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx55Q6ZPL9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
Ddx55Q6ZPL9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx55Q6ZPL9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx55Q6ZPL9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx55Q6ZPL9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx55Q6ZPL9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx55Q6ZPL9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx55Q6ZPL9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx55Q6ZPL9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx55Q6ZPL9 Flg-201ENSMUST00000050758 1488 ntBASIC21.5■■□□□ 1.03
Ddx55Q6ZPL9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx55Q6ZPL9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx55Q6ZPL9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Ddx55Q6ZPL9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx55Q6ZPL9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx55Q6ZPL9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx55Q6ZPL9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx55Q6ZPL9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx55Q6ZPL9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx55Q6ZPL9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx55Q6ZPL9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx55Q6ZPL9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx55Q6ZPL9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx55Q6ZPL9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Ddx55Q6ZPL9 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.48■■□□□ 1.03
Ddx55Q6ZPL9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx55Q6ZPL9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx55Q6ZPL9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.48■■□□□ 1.03
Ddx55Q6ZPL9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.48■■□□□ 1.03
Ddx55Q6ZPL9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx55Q6ZPL9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx55Q6ZPL9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx55Q6ZPL9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx55Q6ZPL9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx55Q6ZPL9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx55Q6ZPL9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx55Q6ZPL9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx55Q6ZPL9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx55Q6ZPL9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx55Q6ZPL9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx55Q6ZPL9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx55Q6ZPL9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.47■■□□□ 1.03
Ddx55Q6ZPL9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.47■■□□□ 1.03
Ddx55Q6ZPL9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx55Q6ZPL9 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.47■■□□□ 1.03
Ddx55Q6ZPL9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx55Q6ZPL9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx55Q6ZPL9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx55Q6ZPL9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.46■■□□□ 1.03
Ddx55Q6ZPL9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.46■■□□□ 1.03
Ddx55Q6ZPL9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx55Q6ZPL9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.46■■□□□ 1.03
Ddx55Q6ZPL9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Ddx55Q6ZPL9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx55Q6ZPL9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx55Q6ZPL9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.45■■□□□ 1.02
Ddx55Q6ZPL9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.45■■□□□ 1.02
Ddx55Q6ZPL9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx55Q6ZPL9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.45■■□□□ 1.02
Ddx55Q6ZPL9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx55Q6ZPL9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx55Q6ZPL9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx55Q6ZPL9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx55Q6ZPL9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx55Q6ZPL9 Gm43799-201ENSMUST00000201845 579 ntBASIC21.44■■□□□ 1.02
Ddx55Q6ZPL9 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.44■■□□□ 1.02
Ddx55Q6ZPL9 Gm5417-201ENSMUST00000079706 384 ntBASIC21.44■■□□□ 1.02
Ddx55Q6ZPL9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Ddx55Q6ZPL9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx55Q6ZPL9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx55Q6ZPL9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx55Q6ZPL9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx55Q6ZPL9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx55Q6ZPL9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Ddx55Q6ZPL9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Ddx55Q6ZPL9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx55Q6ZPL9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
Ddx55Q6ZPL9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx55Q6ZPL9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx55Q6ZPL9 Gm6433-201ENSMUST00000118634 875 ntBASIC21.43■■□□□ 1.02
Ddx55Q6ZPL9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx55Q6ZPL9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.43■■□□□ 1.02
Ddx55Q6ZPL9 Gm10231-201ENSMUST00000181584 441 ntBASIC21.43■■□□□ 1.02
Ddx55Q6ZPL9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx55Q6ZPL9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.43■■□□□ 1.02
Ddx55Q6ZPL9 Gm10175-202ENSMUST00000208752 441 ntBASIC21.43■■□□□ 1.02
Ddx55Q6ZPL9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx55Q6ZPL9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx55Q6ZPL9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ddx55Q6ZPL9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ddx55Q6ZPL9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.43■■□□□ 1.02
Ddx55Q6ZPL9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx55Q6ZPL9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx55Q6ZPL9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
Ddx55Q6ZPL9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.42■■□□□ 1.02
Ddx55Q6ZPL9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms