Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Dhx40Q6PE54 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Dhx40Q6PE54 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Dhx40Q6PE54 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Dhx40Q6PE54 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Dhx40Q6PE54 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.83■□□□□ 0.93
Dhx40Q6PE54 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Dhx40Q6PE54 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Dhx40Q6PE54 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.83■□□□□ 0.93
Dhx40Q6PE54 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Dhx40Q6PE54 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.83■□□□□ 0.93
Dhx40Q6PE54 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Dhx40Q6PE54 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Dhx40Q6PE54 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Dhx40Q6PE54 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Dhx40Q6PE54 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Dhx40Q6PE54 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Dhx40Q6PE54 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.82■□□□□ 0.92
Dhx40Q6PE54 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Dhx40Q6PE54 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Dhx40Q6PE54 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Dhx40Q6PE54 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.82■□□□□ 0.92
Dhx40Q6PE54 Gm12251-201ENSMUST00000117893 792 ntBASIC20.82■□□□□ 0.92
Dhx40Q6PE54 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Dhx40Q6PE54 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Dhx40Q6PE54 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.82■□□□□ 0.92
Dhx40Q6PE54 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Dhx40Q6PE54 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Dhx40Q6PE54 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Dhx40Q6PE54 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Dhx40Q6PE54 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Dhx40Q6PE54 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Dhx40Q6PE54 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.81■□□□□ 0.92
Dhx40Q6PE54 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Dhx40Q6PE54 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Dhx40Q6PE54 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.81■□□□□ 0.92
Dhx40Q6PE54 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.81■□□□□ 0.92
Dhx40Q6PE54 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.81■□□□□ 0.92
Dhx40Q6PE54 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Dhx40Q6PE54 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Dhx40Q6PE54 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Dhx40Q6PE54 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Dhx40Q6PE54 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Dhx40Q6PE54 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Dhx40Q6PE54 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Dhx40Q6PE54 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.8■□□□□ 0.92
Dhx40Q6PE54 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Dhx40Q6PE54 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Dhx40Q6PE54 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Dhx40Q6PE54 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Dhx40Q6PE54 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Dhx40Q6PE54 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Dhx40Q6PE54 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Dhx40Q6PE54 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Dhx40Q6PE54 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Dhx40Q6PE54 Gm7860-201ENSMUST00000121190 879 ntBASIC20.79■□□□□ 0.92
Dhx40Q6PE54 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Dhx40Q6PE54 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.79■□□□□ 0.92
Dhx40Q6PE54 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Dhx40Q6PE54 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Dhx40Q6PE54 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Dhx40Q6PE54 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Dhx40Q6PE54 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Dhx40Q6PE54 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Dhx40Q6PE54 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Dhx40Q6PE54 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Dhx40Q6PE54 Gm43137-201ENSMUST00000198052 594 ntBASIC20.78■□□□□ 0.92
Dhx40Q6PE54 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Dhx40Q6PE54 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Dhx40Q6PE54 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Dhx40Q6PE54 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Dhx40Q6PE54 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Dhx40Q6PE54 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Dhx40Q6PE54 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Dhx40Q6PE54 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Dhx40Q6PE54 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Dhx40Q6PE54 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Dhx40Q6PE54 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Dhx40Q6PE54 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Dhx40Q6PE54 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Dhx40Q6PE54 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Dhx40Q6PE54 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.91
Dhx40Q6PE54 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Dhx40Q6PE54 Gm12821-201ENSMUST00000120022 600 ntBASIC20.76■□□□□ 0.91
Dhx40Q6PE54 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Dhx40Q6PE54 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.76■□□□□ 0.91
Dhx40Q6PE54 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Dhx40Q6PE54 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.76■□□□□ 0.91
Dhx40Q6PE54 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Dhx40Q6PE54 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Dhx40Q6PE54 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Dhx40Q6PE54 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Dhx40Q6PE54 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Dhx40Q6PE54 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Dhx40Q6PE54 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Dhx40Q6PE54 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Dhx40Q6PE54 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Dhx40Q6PE54 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
Dhx40Q6PE54 Gm27454-201ENSMUST00000185090 204 ntBASIC20.75■□□□□ 0.91
Dhx40Q6PE54 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms