Protein–RNA interactions for Protein: Q6PDC0

Rundc3b, RUN domain-containing protein 3B, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3bQ6PDC0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rundc3bQ6PDC0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rundc3bQ6PDC0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rundc3bQ6PDC0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.69■□□□□ 0.42
Rundc3bQ6PDC0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rundc3bQ6PDC0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rundc3bQ6PDC0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rundc3bQ6PDC0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.69■□□□□ 0.42
Rundc3bQ6PDC0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rundc3bQ6PDC0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rundc3bQ6PDC0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rundc3bQ6PDC0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rundc3bQ6PDC0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rundc3bQ6PDC0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rundc3bQ6PDC0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rundc3bQ6PDC0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rundc3bQ6PDC0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rundc3bQ6PDC0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rundc3bQ6PDC0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rundc3bQ6PDC0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rundc3bQ6PDC0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rundc3bQ6PDC0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rundc3bQ6PDC0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.68■□□□□ 0.42
Rundc3bQ6PDC0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rundc3bQ6PDC0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rundc3bQ6PDC0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rundc3bQ6PDC0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.68■□□□□ 0.42
Rundc3bQ6PDC0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rundc3bQ6PDC0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rundc3bQ6PDC0 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.68■□□□□ 0.42
Rundc3bQ6PDC0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rundc3bQ6PDC0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
Rundc3bQ6PDC0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rundc3bQ6PDC0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rundc3bQ6PDC0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rundc3bQ6PDC0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rundc3bQ6PDC0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rundc3bQ6PDC0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.67■□□□□ 0.42
Rundc3bQ6PDC0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.67■□□□□ 0.42
Rundc3bQ6PDC0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.67■□□□□ 0.42
Rundc3bQ6PDC0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rundc3bQ6PDC0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rundc3bQ6PDC0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rundc3bQ6PDC0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rundc3bQ6PDC0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rundc3bQ6PDC0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rundc3bQ6PDC0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rundc3bQ6PDC0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rundc3bQ6PDC0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rundc3bQ6PDC0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rundc3bQ6PDC0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
Rundc3bQ6PDC0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rundc3bQ6PDC0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rundc3bQ6PDC0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rundc3bQ6PDC0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rundc3bQ6PDC0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rundc3bQ6PDC0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rundc3bQ6PDC0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Rundc3bQ6PDC0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rundc3bQ6PDC0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rundc3bQ6PDC0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rundc3bQ6PDC0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rundc3bQ6PDC0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rundc3bQ6PDC0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rundc3bQ6PDC0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rundc3bQ6PDC0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rundc3bQ6PDC0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rundc3bQ6PDC0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rundc3bQ6PDC0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rundc3bQ6PDC0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rundc3bQ6PDC0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rundc3bQ6PDC0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rundc3bQ6PDC0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rundc3bQ6PDC0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rundc3bQ6PDC0 Etf1-202ENSMUST00000180351 108 ntBASIC17.64■□□□□ 0.41
Rundc3bQ6PDC0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.64■□□□□ 0.41
Rundc3bQ6PDC0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rundc3bQ6PDC0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.64■□□□□ 0.41
Rundc3bQ6PDC0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rundc3bQ6PDC0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rundc3bQ6PDC0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.63■□□□□ 0.41
Rundc3bQ6PDC0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rundc3bQ6PDC0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.63■□□□□ 0.41
Rundc3bQ6PDC0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.63■□□□□ 0.41
Rundc3bQ6PDC0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.63■□□□□ 0.41
Rundc3bQ6PDC0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rundc3bQ6PDC0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rundc3bQ6PDC0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rundc3bQ6PDC0 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.63■□□□□ 0.41
Rundc3bQ6PDC0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rundc3bQ6PDC0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rundc3bQ6PDC0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rundc3bQ6PDC0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rundc3bQ6PDC0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rundc3bQ6PDC0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rundc3bQ6PDC0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.62■□□□□ 0.41
Rundc3bQ6PDC0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rundc3bQ6PDC0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.62■□□□□ 0.41
Rundc3bQ6PDC0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rundc3bQ6PDC0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms