Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ShbQ6PD21 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ShbQ6PD21 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ShbQ6PD21 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ShbQ6PD21 Gm18025-201ENSMUST00000221733 862 ntBASIC20.54■□□□□ 0.88
ShbQ6PD21 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.54■□□□□ 0.88
ShbQ6PD21 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ShbQ6PD21 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ShbQ6PD21 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ShbQ6PD21 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ShbQ6PD21 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ShbQ6PD21 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
ShbQ6PD21 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.53■□□□□ 0.88
ShbQ6PD21 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ShbQ6PD21 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ShbQ6PD21 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ShbQ6PD21 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ShbQ6PD21 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.53■□□□□ 0.88
ShbQ6PD21 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ShbQ6PD21 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
ShbQ6PD21 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ShbQ6PD21 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ShbQ6PD21 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.53■□□□□ 0.88
ShbQ6PD21 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ShbQ6PD21 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ShbQ6PD21 Gm42545-201ENSMUST00000202755 922 ntBASIC20.52■□□□□ 0.88
ShbQ6PD21 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.52■□□□□ 0.88
ShbQ6PD21 Gm10138-203ENSMUST00000206952 366 ntBASIC20.52■□□□□ 0.88
ShbQ6PD21 Timm23-208ENSMUST00000226683 750 ntBASIC20.52■□□□□ 0.88
ShbQ6PD21 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ShbQ6PD21 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
ShbQ6PD21 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ShbQ6PD21 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
ShbQ6PD21 Zfp783-201ENSMUST00000095946 670 ntBASIC20.52■□□□□ 0.88
ShbQ6PD21 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ShbQ6PD21 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.51■□□□□ 0.87
ShbQ6PD21 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ShbQ6PD21 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ShbQ6PD21 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ShbQ6PD21 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.51■□□□□ 0.87
ShbQ6PD21 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.51■□□□□ 0.87
ShbQ6PD21 Gm6345-202ENSMUST00000180900 204 ntBASIC20.51■□□□□ 0.87
ShbQ6PD21 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ShbQ6PD21 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ShbQ6PD21 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ShbQ6PD21 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ShbQ6PD21 Gm37292-201ENSMUST00000192062 758 ntBASIC20.5■□□□□ 0.87
ShbQ6PD21 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ShbQ6PD21 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ShbQ6PD21 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.5■□□□□ 0.87
ShbQ6PD21 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ShbQ6PD21 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ShbQ6PD21 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ShbQ6PD21 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ShbQ6PD21 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ShbQ6PD21 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.49■□□□□ 0.87
ShbQ6PD21 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.49■□□□□ 0.87
ShbQ6PD21 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ShbQ6PD21 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ShbQ6PD21 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.49■□□□□ 0.87
ShbQ6PD21 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ShbQ6PD21 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ShbQ6PD21 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
ShbQ6PD21 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ShbQ6PD21 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
ShbQ6PD21 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
ShbQ6PD21 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.48■□□□□ 0.87
ShbQ6PD21 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.48■□□□□ 0.87
ShbQ6PD21 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ShbQ6PD21 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ShbQ6PD21 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ShbQ6PD21 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ShbQ6PD21 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.48■□□□□ 0.87
ShbQ6PD21 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ShbQ6PD21 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ShbQ6PD21 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ShbQ6PD21 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.47■□□□□ 0.87
ShbQ6PD21 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ShbQ6PD21 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.47■□□□□ 0.87
ShbQ6PD21 Gm33142-201ENSMUST00000193913 867 ntBASIC20.47■□□□□ 0.87
ShbQ6PD21 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.47■□□□□ 0.87
ShbQ6PD21 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ShbQ6PD21 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ShbQ6PD21 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
ShbQ6PD21 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ShbQ6PD21 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ShbQ6PD21 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.47■□□□□ 0.87
ShbQ6PD21 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ShbQ6PD21 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ShbQ6PD21 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ShbQ6PD21 Gm15375-201ENSMUST00000119510 849 ntBASIC20.46■□□□□ 0.87
ShbQ6PD21 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ShbQ6PD21 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ShbQ6PD21 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.46■□□□□ 0.87
ShbQ6PD21 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ShbQ6PD21 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ShbQ6PD21 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ShbQ6PD21 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ShbQ6PD21 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.45■□□□□ 0.86
ShbQ6PD21 Gm10013-201ENSMUST00000106074 672 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms