Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rtl3Q6P1Y1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Rtl3Q6P1Y1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtl3Q6P1Y1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtl3Q6P1Y1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtl3Q6P1Y1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rtl3Q6P1Y1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rtl3Q6P1Y1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.35■□□□□ 0.69
Rtl3Q6P1Y1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtl3Q6P1Y1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.34■□□□□ 0.69
Rtl3Q6P1Y1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rtl3Q6P1Y1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rtl3Q6P1Y1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtl3Q6P1Y1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtl3Q6P1Y1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rtl3Q6P1Y1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.34■□□□□ 0.69
Rtl3Q6P1Y1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.34■□□□□ 0.69
Rtl3Q6P1Y1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.34■□□□□ 0.69
Rtl3Q6P1Y1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtl3Q6P1Y1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rtl3Q6P1Y1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.34■□□□□ 0.69
Rtl3Q6P1Y1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rtl3Q6P1Y1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rtl3Q6P1Y1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rtl3Q6P1Y1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Rtl3Q6P1Y1 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.33■□□□□ 0.68
Rtl3Q6P1Y1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Rtl3Q6P1Y1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtl3Q6P1Y1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtl3Q6P1Y1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Rtl3Q6P1Y1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtl3Q6P1Y1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rtl3Q6P1Y1 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.33■□□□□ 0.68
Rtl3Q6P1Y1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rtl3Q6P1Y1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rtl3Q6P1Y1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtl3Q6P1Y1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Rtl3Q6P1Y1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rtl3Q6P1Y1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.32■□□□□ 0.68
Rtl3Q6P1Y1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtl3Q6P1Y1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rtl3Q6P1Y1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtl3Q6P1Y1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rtl3Q6P1Y1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtl3Q6P1Y1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rtl3Q6P1Y1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rtl3Q6P1Y1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rtl3Q6P1Y1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtl3Q6P1Y1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rtl3Q6P1Y1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtl3Q6P1Y1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtl3Q6P1Y1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.31■□□□□ 0.68
Rtl3Q6P1Y1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.31■□□□□ 0.68
Rtl3Q6P1Y1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.31■□□□□ 0.68
Rtl3Q6P1Y1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtl3Q6P1Y1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rtl3Q6P1Y1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtl3Q6P1Y1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rtl3Q6P1Y1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtl3Q6P1Y1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtl3Q6P1Y1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rtl3Q6P1Y1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.3■□□□□ 0.68
Rtl3Q6P1Y1 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.3■□□□□ 0.68
Rtl3Q6P1Y1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtl3Q6P1Y1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtl3Q6P1Y1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtl3Q6P1Y1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.3■□□□□ 0.68
Rtl3Q6P1Y1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtl3Q6P1Y1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtl3Q6P1Y1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtl3Q6P1Y1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rtl3Q6P1Y1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Rtl3Q6P1Y1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.3■□□□□ 0.68
Rtl3Q6P1Y1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rtl3Q6P1Y1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rtl3Q6P1Y1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtl3Q6P1Y1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtl3Q6P1Y1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtl3Q6P1Y1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtl3Q6P1Y1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rtl3Q6P1Y1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtl3Q6P1Y1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtl3Q6P1Y1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.29■□□□□ 0.68
Rtl3Q6P1Y1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rtl3Q6P1Y1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtl3Q6P1Y1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtl3Q6P1Y1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtl3Q6P1Y1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtl3Q6P1Y1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtl3Q6P1Y1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.28■□□□□ 0.68
Rtl3Q6P1Y1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtl3Q6P1Y1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtl3Q6P1Y1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rtl3Q6P1Y1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rtl3Q6P1Y1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rtl3Q6P1Y1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtl3Q6P1Y1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtl3Q6P1Y1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtl3Q6P1Y1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtl3Q6P1Y1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms