Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cep290Q6A078 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cep290Q6A078 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.29■□□□□ 0.68
Cep290Q6A078 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cep290Q6A078 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cep290Q6A078 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cep290Q6A078 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cep290Q6A078 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cep290Q6A078 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Cep290Q6A078 Flg-201ENSMUST00000050758 1488 ntBASIC19.28■□□□□ 0.68
Cep290Q6A078 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.28■□□□□ 0.68
Cep290Q6A078 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.28■□□□□ 0.68
Cep290Q6A078 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.28■□□□□ 0.68
Cep290Q6A078 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cep290Q6A078 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.27■□□□□ 0.68
Cep290Q6A078 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cep290Q6A078 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Cep290Q6A078 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Cep290Q6A078 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cep290Q6A078 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cep290Q6A078 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cep290Q6A078 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cep290Q6A078 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cep290Q6A078 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cep290Q6A078 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cep290Q6A078 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cep290Q6A078 Gm43183-201ENSMUST00000200632 547 ntBASIC19.26■□□□□ 0.67
Cep290Q6A078 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cep290Q6A078 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cep290Q6A078 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Cep290Q6A078 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cep290Q6A078 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cep290Q6A078 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cep290Q6A078 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cep290Q6A078 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cep290Q6A078 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.26■□□□□ 0.67
Cep290Q6A078 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cep290Q6A078 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cep290Q6A078 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cep290Q6A078 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cep290Q6A078 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cep290Q6A078 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cep290Q6A078 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cep290Q6A078 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cep290Q6A078 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cep290Q6A078 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cep290Q6A078 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cep290Q6A078 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cep290Q6A078 Gm12382-201ENSMUST00000122005 922 ntBASIC19.25■□□□□ 0.67
Cep290Q6A078 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.25■□□□□ 0.67
Cep290Q6A078 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cep290Q6A078 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cep290Q6A078 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.24■□□□□ 0.67
Cep290Q6A078 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cep290Q6A078 Gm45058-201ENSMUST00000205810 766 ntBASIC19.24■□□□□ 0.67
Cep290Q6A078 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cep290Q6A078 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cep290Q6A078 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cep290Q6A078 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cep290Q6A078 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cep290Q6A078 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cep290Q6A078 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cep290Q6A078 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cep290Q6A078 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cep290Q6A078 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cep290Q6A078 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Cep290Q6A078 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cep290Q6A078 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Cep290Q6A078 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cep290Q6A078 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cep290Q6A078 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cep290Q6A078 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cep290Q6A078 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cep290Q6A078 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cep290Q6A078 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cep290Q6A078 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cep290Q6A078 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cep290Q6A078 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cep290Q6A078 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cep290Q6A078 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cep290Q6A078 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cep290Q6A078 Gm18959-201ENSMUST00000208954 655 ntBASIC19.22■□□□□ 0.67
Cep290Q6A078 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.22■□□□□ 0.67
Cep290Q6A078 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cep290Q6A078 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cep290Q6A078 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.21■□□□□ 0.67
Cep290Q6A078 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cep290Q6A078 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cep290Q6A078 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cep290Q6A078 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cep290Q6A078 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cep290Q6A078 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.21■□□□□ 0.67
Cep290Q6A078 Gm25016-201ENSMUST00000158399 131 ntBASIC19.21■□□□□ 0.67
Cep290Q6A078 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cep290Q6A078 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cep290Q6A078 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.21■□□□□ 0.67
Cep290Q6A078 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cep290Q6A078 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cep290Q6A078 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cep290Q6A078 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms