Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC23.08■■□□□ 1.29
Col11a2Q64739 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Col11a2Q64739 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Col11a2Q64739 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Col11a2Q64739 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Col11a2Q64739 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Col11a2Q64739 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Col11a2Q64739 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Col11a2Q64739 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Col11a2Q64739 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Col11a2Q64739 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col11a2Q64739 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col11a2Q64739 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col11a2Q64739 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col11a2Q64739 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col11a2Q64739 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Col11a2Q64739 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Col11a2Q64739 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC23.07■■□□□ 1.28
Col11a2Q64739 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col11a2Q64739 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Col11a2Q64739 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col11a2Q64739 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Col11a2Q64739 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Col11a2Q64739 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Col11a2Q64739 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col11a2Q64739 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col11a2Q64739 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col11a2Q64739 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Col11a2Q64739 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col11a2Q64739 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col11a2Q64739 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Col11a2Q64739 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC23.05■■□□□ 1.28
Col11a2Q64739 Otx2os1-204ENSMUST00000227221 751 ntBASIC23.05■■□□□ 1.28
Col11a2Q64739 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col11a2Q64739 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Col11a2Q64739 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col11a2Q64739 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col11a2Q64739 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col11a2Q64739 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col11a2Q64739 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col11a2Q64739 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col11a2Q64739 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col11a2Q64739 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col11a2Q64739 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col11a2Q64739 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col11a2Q64739 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col11a2Q64739 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col11a2Q64739 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col11a2Q64739 Gm5540-201ENSMUST00000131852 1848 ntBASIC23.04■■□□□ 1.28
Col11a2Q64739 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Col11a2Q64739 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Col11a2Q64739 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC23.04■■□□□ 1.28
Col11a2Q64739 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col11a2Q64739 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col11a2Q64739 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Col11a2Q64739 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col11a2Q64739 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Col11a2Q64739 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col11a2Q64739 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col11a2Q64739 Gm43183-201ENSMUST00000200632 547 ntBASIC23.02■■□□□ 1.28
Col11a2Q64739 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Col11a2Q64739 Gm37352-201ENSMUST00000193908 2181 ntBASIC23.02■■□□□ 1.28
Col11a2Q64739 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Col11a2Q64739 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col11a2Q64739 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Col11a2Q64739 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Col11a2Q64739 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC23.02■■□□□ 1.27
Col11a2Q64739 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Col11a2Q64739 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col11a2Q64739 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Col11a2Q64739 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Col11a2Q64739 Gm27741-201ENSMUST00000185060 237 ntBASIC23.01■■□□□ 1.27
Col11a2Q64739 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC23.01■■□□□ 1.27
Col11a2Q64739 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col11a2Q64739 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col11a2Q64739 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC23.01■■□□□ 1.27
Col11a2Q64739 Zfp783-201ENSMUST00000095946 670 ntBASIC23.01■■□□□ 1.27
Col11a2Q64739 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col11a2Q64739 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Col11a2Q64739 Gm45560-201ENSMUST00000211492 1472 ntBASIC23.01■■□□□ 1.27
Col11a2Q64739 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC23■■□□□ 1.27
Col11a2Q64739 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC23■■□□□ 1.27
Col11a2Q64739 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
Col11a2Q64739 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC23■■□□□ 1.27
Col11a2Q64739 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Col11a2Q64739 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC22.99■■□□□ 1.27
Col11a2Q64739 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Col11a2Q64739 Gm12382-201ENSMUST00000122005 922 ntBASIC22.99■■□□□ 1.27
Col11a2Q64739 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Col11a2Q64739 Gm6728-201ENSMUST00000178117 1065 ntBASIC22.99■■□□□ 1.27
Col11a2Q64739 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC22.99■■□□□ 1.27
Col11a2Q64739 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col11a2Q64739 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col11a2Q64739 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col11a2Q64739 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col11a2Q64739 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Col11a2Q64739 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col11a2Q64739 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Col11a2Q64739 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC22.99■■□□□ 1.27
Col11a2Q64739 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC22.99■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms