Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VclQ64727 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VclQ64727 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VclQ64727 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.39■□□□□ 0.54
VclQ64727 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
VclQ64727 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.39■□□□□ 0.53
VclQ64727 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.39■□□□□ 0.53
VclQ64727 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VclQ64727 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
VclQ64727 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VclQ64727 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VclQ64727 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VclQ64727 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VclQ64727 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
VclQ64727 Gm12933-201ENSMUST00000120203 872 ntBASIC18.38■□□□□ 0.53
VclQ64727 Gm6420-201ENSMUST00000193885 723 ntBASIC18.38■□□□□ 0.53
VclQ64727 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.38■□□□□ 0.53
VclQ64727 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VclQ64727 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.38■□□□□ 0.53
VclQ64727 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.38■□□□□ 0.53
VclQ64727 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.38■□□□□ 0.53
VclQ64727 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VclQ64727 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VclQ64727 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
VclQ64727 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VclQ64727 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VclQ64727 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VclQ64727 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VclQ64727 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
VclQ64727 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VclQ64727 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VclQ64727 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VclQ64727 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VclQ64727 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VclQ64727 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
VclQ64727 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VclQ64727 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VclQ64727 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.37■□□□□ 0.53
VclQ64727 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.37■□□□□ 0.53
VclQ64727 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VclQ64727 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VclQ64727 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VclQ64727 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VclQ64727 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VclQ64727 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VclQ64727 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VclQ64727 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.36■□□□□ 0.53
VclQ64727 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VclQ64727 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VclQ64727 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
VclQ64727 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VclQ64727 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VclQ64727 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
VclQ64727 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VclQ64727 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VclQ64727 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
VclQ64727 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VclQ64727 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VclQ64727 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VclQ64727 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VclQ64727 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
VclQ64727 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VclQ64727 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VclQ64727 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VclQ64727 Nespas-201ENSMUST00000143738 1083 ntBASIC18.35■□□□□ 0.53
VclQ64727 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
VclQ64727 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.35■□□□□ 0.53
VclQ64727 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VclQ64727 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
VclQ64727 Gm10602-201ENSMUST00000098239 609 ntBASIC18.35■□□□□ 0.53
VclQ64727 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
VclQ64727 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VclQ64727 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
VclQ64727 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VclQ64727 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VclQ64727 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VclQ64727 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VclQ64727 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VclQ64727 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VclQ64727 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VclQ64727 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.34■□□□□ 0.53
VclQ64727 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VclQ64727 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VclQ64727 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VclQ64727 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
VclQ64727 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VclQ64727 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
VclQ64727 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
VclQ64727 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.34■□□□□ 0.53
VclQ64727 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VclQ64727 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
VclQ64727 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
VclQ64727 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VclQ64727 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
VclQ64727 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VclQ64727 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VclQ64727 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VclQ64727 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VclQ64727 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
VclQ64727 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms