Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc3Q64519 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc3Q64519 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc3Q64519 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc3Q64519 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Sdc3Q64519 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.92■□□□□ 0.46
Sdc3Q64519 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.92■□□□□ 0.46
Sdc3Q64519 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc3Q64519 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Sdc3Q64519 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc3Q64519 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc3Q64519 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc3Q64519 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.92■□□□□ 0.46
Sdc3Q64519 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Sdc3Q64519 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.92■□□□□ 0.46
Sdc3Q64519 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.92■□□□□ 0.46
Sdc3Q64519 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sdc3Q64519 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Sdc3Q64519 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.91■□□□□ 0.46
Sdc3Q64519 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdc3Q64519 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdc3Q64519 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Sdc3Q64519 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
Sdc3Q64519 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.91■□□□□ 0.46
Sdc3Q64519 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdc3Q64519 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdc3Q64519 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdc3Q64519 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdc3Q64519 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdc3Q64519 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sdc3Q64519 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.91■□□□□ 0.46
Sdc3Q64519 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc3Q64519 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.9■□□□□ 0.46
Sdc3Q64519 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc3Q64519 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc3Q64519 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc3Q64519 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc3Q64519 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc3Q64519 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Sdc3Q64519 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.9■□□□□ 0.46
Sdc3Q64519 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc3Q64519 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc3Q64519 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sdc3Q64519 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc3Q64519 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc3Q64519 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc3Q64519 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc3Q64519 Gm12933-201ENSMUST00000120203 872 ntBASIC17.89■□□□□ 0.45
Sdc3Q64519 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc3Q64519 Mir5133-201ENSMUST00000174955 77 ntBASIC17.89■□□□□ 0.45
Sdc3Q64519 Gm6365-201ENSMUST00000054711 744 ntBASIC17.89■□□□□ 0.45
Sdc3Q64519 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc3Q64519 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.89■□□□□ 0.45
Sdc3Q64519 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc3Q64519 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sdc3Q64519 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Sdc3Q64519 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc3Q64519 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc3Q64519 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc3Q64519 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sdc3Q64519 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Sdc3Q64519 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.88■□□□□ 0.45
Sdc3Q64519 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.88■□□□□ 0.45
Sdc3Q64519 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Sdc3Q64519 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.88■□□□□ 0.45
Sdc3Q64519 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc3Q64519 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc3Q64519 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc3Q64519 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc3Q64519 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Sdc3Q64519 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc3Q64519 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc3Q64519 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc3Q64519 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc3Q64519 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc3Q64519 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc3Q64519 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Sdc3Q64519 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Sdc3Q64519 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc3Q64519 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc3Q64519 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc3Q64519 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc3Q64519 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc3Q64519 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc3Q64519 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Sdc3Q64519 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sdc3Q64519 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Sdc3Q64519 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc3Q64519 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc3Q64519 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc3Q64519 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc3Q64519 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Sdc3Q64519 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc3Q64519 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc3Q64519 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.86■□□□□ 0.45
Sdc3Q64519 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc3Q64519 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.86■□□□□ 0.45
Sdc3Q64519 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.86■□□□□ 0.45
Sdc3Q64519 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc3Q64519 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms