Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col7a1Q63870 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Col7a1Q63870 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col7a1Q63870 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col7a1Q63870 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col7a1Q63870 Gm27704-201ENSMUST00000185094 107 ntBASIC15.77■□□□□ 0.12
Col7a1Q63870 Gm18025-201ENSMUST00000221733 862 ntBASIC15.77■□□□□ 0.12
Col7a1Q63870 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Col7a1Q63870 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col7a1Q63870 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.77■□□□□ 0.11
Col7a1Q63870 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col7a1Q63870 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.77■□□□□ 0.11
Col7a1Q63870 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col7a1Q63870 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col7a1Q63870 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.76■□□□□ 0.11
Col7a1Q63870 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.76■□□□□ 0.11
Col7a1Q63870 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col7a1Q63870 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.76■□□□□ 0.11
Col7a1Q63870 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col7a1Q63870 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col7a1Q63870 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col7a1Q63870 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col7a1Q63870 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col7a1Q63870 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col7a1Q63870 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Col7a1Q63870 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Col7a1Q63870 Gm37415-201ENSMUST00000192265 2054 ntBASIC15.76■□□□□ 0.11
Col7a1Q63870 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col7a1Q63870 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.75■□□□□ 0.11
Col7a1Q63870 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.75■□□□□ 0.11
Col7a1Q63870 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Col7a1Q63870 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col7a1Q63870 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Col7a1Q63870 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col7a1Q63870 Gm18669-201ENSMUST00000216049 778 ntBASIC15.75■□□□□ 0.11
Col7a1Q63870 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col7a1Q63870 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col7a1Q63870 Mtag2-201ENSMUST00000058665 714 ntBASIC15.75■□□□□ 0.11
Col7a1Q63870 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col7a1Q63870 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col7a1Q63870 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Col7a1Q63870 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col7a1Q63870 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col7a1Q63870 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col7a1Q63870 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Col7a1Q63870 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.74■□□□□ 0.11
Col7a1Q63870 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col7a1Q63870 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Col7a1Q63870 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col7a1Q63870 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Col7a1Q63870 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.74■□□□□ 0.11
Col7a1Q63870 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col7a1Q63870 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col7a1Q63870 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.74■□□□□ 0.11
Col7a1Q63870 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col7a1Q63870 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col7a1Q63870 Gm17641-201ENSMUST00000166328 2350 ntBASIC15.73■□□□□ 0.11
Col7a1Q63870 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Col7a1Q63870 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col7a1Q63870 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.73■□□□□ 0.11
Col7a1Q63870 Gm18115-201ENSMUST00000221209 621 ntBASIC15.73■□□□□ 0.11
Col7a1Q63870 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col7a1Q63870 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col7a1Q63870 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col7a1Q63870 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col7a1Q63870 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col7a1Q63870 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.73■□□□□ 0.11
Col7a1Q63870 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col7a1Q63870 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Col7a1Q63870 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col7a1Q63870 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col7a1Q63870 Gm15375-201ENSMUST00000119510 849 ntBASIC15.72■□□□□ 0.11
Col7a1Q63870 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Col7a1Q63870 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col7a1Q63870 Flg-201ENSMUST00000050758 1488 ntBASIC15.72■□□□□ 0.11
Col7a1Q63870 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.72■□□□□ 0.11
Col7a1Q63870 Gm12382-201ENSMUST00000122005 922 ntBASIC15.72■□□□□ 0.11
Col7a1Q63870 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.72■□□□□ 0.11
Col7a1Q63870 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col7a1Q63870 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col7a1Q63870 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.72■□□□□ 0.11
Col7a1Q63870 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col7a1Q63870 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Col7a1Q63870 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.72■□□□□ 0.11
Col7a1Q63870 Mir5130-201ENSMUST00000175160 84 ntBASIC15.71■□□□□ 0.11
Col7a1Q63870 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Col7a1Q63870 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.71■□□□□ 0.11
Col7a1Q63870 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col7a1Q63870 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col7a1Q63870 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Col7a1Q63870 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.71■□□□□ 0.11
Col7a1Q63870 Gm34391-201ENSMUST00000203706 907 ntBASIC15.71■□□□□ 0.11
Col7a1Q63870 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col7a1Q63870 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col7a1Q63870 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Col7a1Q63870 Gm37292-201ENSMUST00000192062 758 ntBASIC15.71■□□□□ 0.1
Col7a1Q63870 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Col7a1Q63870 Il17rd-202ENSMUST00000223942 2186 ntBASIC15.7■□□□□ 0.1
Col7a1Q63870 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col7a1Q63870 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms