Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC13.83□□□□□ -0.2
Ss18Q62280 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ss18Q62280 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.83□□□□□ -0.2
Ss18Q62280 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ss18Q62280 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ss18Q62280 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ss18Q62280 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ss18Q62280 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ss18Q62280 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ss18Q62280 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Ss18Q62280 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ss18Q62280 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ss18Q62280 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ss18Q62280 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Ss18Q62280 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ss18Q62280 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ss18Q62280 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ss18Q62280 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ss18Q62280 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.82□□□□□ -0.2
Ss18Q62280 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ss18Q62280 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ss18Q62280 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ss18Q62280 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.82□□□□□ -0.2
Ss18Q62280 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ss18Q62280 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ss18Q62280 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ss18Q62280 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Ss18Q62280 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ss18Q62280 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ss18Q62280 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ss18Q62280 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Ss18Q62280 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ss18Q62280 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ss18Q62280 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ss18Q62280 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ss18Q62280 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ss18Q62280 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.81□□□□□ -0.2
Ss18Q62280 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ss18Q62280 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ss18Q62280 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.81□□□□□ -0.2
Ss18Q62280 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.81□□□□□ -0.2
Ss18Q62280 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ss18Q62280 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ss18Q62280 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ss18Q62280 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ss18Q62280 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ss18Q62280 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.81□□□□□ -0.2
Ss18Q62280 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC13.81□□□□□ -0.2
Ss18Q62280 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Ss18Q62280 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ss18Q62280 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ss18Q62280 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.81□□□□□ -0.2
Ss18Q62280 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ss18Q62280 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ss18Q62280 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ss18Q62280 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ss18Q62280 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.8□□□□□ -0.2
Ss18Q62280 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ss18Q62280 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ss18Q62280 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ss18Q62280 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Ss18Q62280 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ss18Q62280 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ss18Q62280 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ss18Q62280 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ss18Q62280 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ss18Q62280 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ss18Q62280 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ss18Q62280 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ss18Q62280 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.8□□□□□ -0.2
Ss18Q62280 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ss18Q62280 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ss18Q62280 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ss18Q62280 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ss18Q62280 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ss18Q62280 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ss18Q62280 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Ss18Q62280 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ss18Q62280 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Ss18Q62280 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ss18Q62280 Gm7160-202ENSMUST00000188519 1027 ntBASIC13.79□□□□□ -0.2
Ss18Q62280 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ss18Q62280 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ss18Q62280 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ss18Q62280 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ss18Q62280 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.79□□□□□ -0.2
Ss18Q62280 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC13.79□□□□□ -0.2
Ss18Q62280 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ss18Q62280 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ss18Q62280 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ss18Q62280 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ss18Q62280 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ss18Q62280 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ss18Q62280 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ss18Q62280 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ss18Q62280 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ss18Q62280 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC13.78□□□□□ -0.2
Ss18Q62280 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ss18Q62280 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.78□□□□□ -0.2
Ss18Q62280 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms