Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rai1Q61818 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rai1Q61818 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rai1Q61818 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rai1Q61818 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.23■□□□□ 0.51
Rai1Q61818 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rai1Q61818 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rai1Q61818 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rai1Q61818 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rai1Q61818 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rai1Q61818 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rai1Q61818 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rai1Q61818 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rai1Q61818 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rai1Q61818 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.22■□□□□ 0.51
Rai1Q61818 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.22■□□□□ 0.51
Rai1Q61818 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.22■□□□□ 0.51
Rai1Q61818 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rai1Q61818 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rai1Q61818 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rai1Q61818 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rai1Q61818 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.22■□□□□ 0.51
Rai1Q61818 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rai1Q61818 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rai1Q61818 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.22■□□□□ 0.51
Rai1Q61818 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rai1Q61818 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rai1Q61818 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Rai1Q61818 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rai1Q61818 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rai1Q61818 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rai1Q61818 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rai1Q61818 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rai1Q61818 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.21■□□□□ 0.51
Rai1Q61818 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rai1Q61818 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rai1Q61818 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rai1Q61818 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rai1Q61818 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rai1Q61818 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rai1Q61818 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rai1Q61818 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Rai1Q61818 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rai1Q61818 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Rai1Q61818 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Rai1Q61818 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.2■□□□□ 0.5
Rai1Q61818 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rai1Q61818 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rai1Q61818 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rai1Q61818 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rai1Q61818 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.2■□□□□ 0.5
Rai1Q61818 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rai1Q61818 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rai1Q61818 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.19■□□□□ 0.5
Rai1Q61818 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rai1Q61818 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rai1Q61818 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rai1Q61818 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.19■□□□□ 0.5
Rai1Q61818 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rai1Q61818 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.19■□□□□ 0.5
Rai1Q61818 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rai1Q61818 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rai1Q61818 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rai1Q61818 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rai1Q61818 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rai1Q61818 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rai1Q61818 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rai1Q61818 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rai1Q61818 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rai1Q61818 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rai1Q61818 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rai1Q61818 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rai1Q61818 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rai1Q61818 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.18■□□□□ 0.5
Rai1Q61818 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rai1Q61818 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rai1Q61818 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rai1Q61818 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rai1Q61818 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rai1Q61818 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rai1Q61818 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rai1Q61818 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rai1Q61818 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rai1Q61818 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rai1Q61818 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rai1Q61818 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rai1Q61818 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rai1Q61818 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rai1Q61818 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rai1Q61818 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rai1Q61818 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rai1Q61818 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rai1Q61818 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Rai1Q61818 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rai1Q61818 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rai1Q61818 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rai1Q61818 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rai1Q61818 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rai1Q61818 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rai1Q61818 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms