Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.51■■□□□ 1.03
Foxn1Q61575 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Foxn1Q61575 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Foxn1Q61575 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Foxn1Q61575 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Foxn1Q61575 Gm9103-201ENSMUST00000119371 405 ntBASIC21.5■■□□□ 1.03
Foxn1Q61575 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Foxn1Q61575 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Foxn1Q61575 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.5■■□□□ 1.03
Foxn1Q61575 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Foxn1Q61575 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Foxn1Q61575 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Foxn1Q61575 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Foxn1Q61575 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Foxn1Q61575 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Foxn1Q61575 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Foxn1Q61575 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Foxn1Q61575 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.49■■□□□ 1.03
Foxn1Q61575 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Foxn1Q61575 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Foxn1Q61575 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Foxn1Q61575 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Foxn1Q61575 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Foxn1Q61575 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Foxn1Q61575 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Foxn1Q61575 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Foxn1Q61575 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Foxn1Q61575 Gm6345-202ENSMUST00000180900 204 ntBASIC21.48■■□□□ 1.03
Foxn1Q61575 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
Foxn1Q61575 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.48■■□□□ 1.03
Foxn1Q61575 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Foxn1Q61575 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Foxn1Q61575 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Foxn1Q61575 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Foxn1Q61575 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Foxn1Q61575 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Foxn1Q61575 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Foxn1Q61575 Gm11927-201ENSMUST00000118472 759 ntBASIC21.47■■□□□ 1.03
Foxn1Q61575 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Foxn1Q61575 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Foxn1Q61575 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Foxn1Q61575 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Foxn1Q61575 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Foxn1Q61575 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.46■■□□□ 1.03
Foxn1Q61575 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.46■■□□□ 1.03
Foxn1Q61575 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Foxn1Q61575 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Foxn1Q61575 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Foxn1Q61575 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC21.46■■□□□ 1.03
Foxn1Q61575 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC21.46■■□□□ 1.03
Foxn1Q61575 AC159205.3-201ENSMUST00000224614 874 ntBASIC21.46■■□□□ 1.03
Foxn1Q61575 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Foxn1Q61575 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Foxn1Q61575 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Foxn1Q61575 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Foxn1Q61575 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.46■■□□□ 1.03
Foxn1Q61575 Flg-201ENSMUST00000050758 1488 ntBASIC21.45■■□□□ 1.03
Foxn1Q61575 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Foxn1Q61575 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Foxn1Q61575 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Foxn1Q61575 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Foxn1Q61575 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.45■■□□□ 1.02
Foxn1Q61575 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Foxn1Q61575 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Foxn1Q61575 Gm10013-201ENSMUST00000106074 672 ntBASIC21.45■■□□□ 1.02
Foxn1Q61575 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Foxn1Q61575 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Foxn1Q61575 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
Foxn1Q61575 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Foxn1Q61575 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Foxn1Q61575 Gm43183-201ENSMUST00000200632 547 ntBASIC21.45■■□□□ 1.02
Foxn1Q61575 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Foxn1Q61575 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Foxn1Q61575 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Foxn1Q61575 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Foxn1Q61575 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Foxn1Q61575 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.44■■□□□ 1.02
Foxn1Q61575 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Foxn1Q61575 AA414768-201ENSMUST00000121924 1257 ntBASIC21.44■■□□□ 1.02
Foxn1Q61575 Odf3b-204ENSMUST00000227834 930 ntBASIC21.44■■□□□ 1.02
Foxn1Q61575 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Foxn1Q61575 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Foxn1Q61575 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
Foxn1Q61575 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Foxn1Q61575 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Foxn1Q61575 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Foxn1Q61575 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Foxn1Q61575 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Foxn1Q61575 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Foxn1Q61575 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Foxn1Q61575 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Foxn1Q61575 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Foxn1Q61575 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Foxn1Q61575 Ank2-226ENSMUST00000189368 339 ntBASIC21.43■■□□□ 1.02
Foxn1Q61575 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Foxn1Q61575 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.43■■□□□ 1.02
Foxn1Q61575 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.43■■□□□ 1.02
Foxn1Q61575 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Foxn1Q61575 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Foxn1Q61575 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms