Protein–RNA interactions for Protein: Q61500

Itm2a, Integral membrane protein 2A, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itm2aQ61500 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.42■□□□□ 0.54
Itm2aQ61500 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Itm2aQ61500 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Itm2aQ61500 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Itm2aQ61500 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Itm2aQ61500 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Itm2aQ61500 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Itm2aQ61500 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Itm2aQ61500 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Itm2aQ61500 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.41■□□□□ 0.54
Itm2aQ61500 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Itm2aQ61500 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Itm2aQ61500 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Itm2aQ61500 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Itm2aQ61500 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Itm2aQ61500 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Itm2aQ61500 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Itm2aQ61500 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Itm2aQ61500 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Itm2aQ61500 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Itm2aQ61500 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Itm2aQ61500 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Itm2aQ61500 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.4■□□□□ 0.54
Itm2aQ61500 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.4■□□□□ 0.54
Itm2aQ61500 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Itm2aQ61500 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Itm2aQ61500 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Itm2aQ61500 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Itm2aQ61500 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Itm2aQ61500 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.4■□□□□ 0.54
Itm2aQ61500 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Itm2aQ61500 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Itm2aQ61500 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Itm2aQ61500 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Itm2aQ61500 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Itm2aQ61500 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Itm2aQ61500 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Itm2aQ61500 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Itm2aQ61500 Gm45102-201ENSMUST00000207427 857 ntBASIC18.39■□□□□ 0.53
Itm2aQ61500 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Itm2aQ61500 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Itm2aQ61500 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Itm2aQ61500 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Itm2aQ61500 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Itm2aQ61500 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Itm2aQ61500 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Itm2aQ61500 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Itm2aQ61500 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Itm2aQ61500 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Itm2aQ61500 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Itm2aQ61500 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Itm2aQ61500 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Itm2aQ61500 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Itm2aQ61500 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Itm2aQ61500 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.38■□□□□ 0.53
Itm2aQ61500 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Itm2aQ61500 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Itm2aQ61500 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Itm2aQ61500 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Itm2aQ61500 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Itm2aQ61500 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Itm2aQ61500 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.37■□□□□ 0.53
Itm2aQ61500 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.37■□□□□ 0.53
Itm2aQ61500 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Itm2aQ61500 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Itm2aQ61500 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Itm2aQ61500 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Itm2aQ61500 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Itm2aQ61500 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Itm2aQ61500 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Itm2aQ61500 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Itm2aQ61500 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.36■□□□□ 0.53
Itm2aQ61500 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Itm2aQ61500 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Itm2aQ61500 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Itm2aQ61500 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Itm2aQ61500 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Itm2aQ61500 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Itm2aQ61500 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Itm2aQ61500 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Itm2aQ61500 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Itm2aQ61500 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Itm2aQ61500 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Itm2aQ61500 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.35■□□□□ 0.53
Itm2aQ61500 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Itm2aQ61500 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Itm2aQ61500 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Itm2aQ61500 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Itm2aQ61500 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itm2aQ61500 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.34■□□□□ 0.53
Itm2aQ61500 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.34■□□□□ 0.53
Itm2aQ61500 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itm2aQ61500 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itm2aQ61500 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Itm2aQ61500 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.34■□□□□ 0.53
Itm2aQ61500 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.34■□□□□ 0.53
Itm2aQ61500 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itm2aQ61500 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itm2aQ61500 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itm2aQ61500 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms