Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ift88Q61371 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ift88Q61371 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ift88Q61371 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ift88Q61371 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ift88Q61371 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ift88Q61371 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ift88Q61371 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ift88Q61371 Grk6-206ENSMUST00000224995 2971 ntBASIC20.73■□□□□ 0.91
Ift88Q61371 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ift88Q61371 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ift88Q61371 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ift88Q61371 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Ift88Q61371 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ift88Q61371 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.73■□□□□ 0.91
Ift88Q61371 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.73■□□□□ 0.91
Ift88Q61371 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Ift88Q61371 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ift88Q61371 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ift88Q61371 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ift88Q61371 Gm7860-201ENSMUST00000121190 879 ntBASIC20.72■□□□□ 0.91
Ift88Q61371 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ift88Q61371 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ift88Q61371 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ift88Q61371 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ift88Q61371 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ift88Q61371 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ift88Q61371 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.72■□□□□ 0.91
Ift88Q61371 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ift88Q61371 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ift88Q61371 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ift88Q61371 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ift88Q61371 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ift88Q61371 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ift88Q61371 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ift88Q61371 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ift88Q61371 Gm11421-201ENSMUST00000122124 294 ntBASIC20.71■□□□□ 0.91
Ift88Q61371 Smad6-203ENSMUST00000179458 273 ntBASIC20.71■□□□□ 0.91
Ift88Q61371 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.71■□□□□ 0.91
Ift88Q61371 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ift88Q61371 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.71■□□□□ 0.91
Ift88Q61371 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ift88Q61371 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ift88Q61371 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ift88Q61371 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ift88Q61371 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Ift88Q61371 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ift88Q61371 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ift88Q61371 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ift88Q61371 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Ift88Q61371 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
Ift88Q61371 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ift88Q61371 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ift88Q61371 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ift88Q61371 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ift88Q61371 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ift88Q61371 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ift88Q61371 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ift88Q61371 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ift88Q61371 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ift88Q61371 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ift88Q61371 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ift88Q61371 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ift88Q61371 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ift88Q61371 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ift88Q61371 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.69■□□□□ 0.9
Ift88Q61371 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ift88Q61371 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ift88Q61371 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
Ift88Q61371 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ift88Q61371 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ift88Q61371 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Ift88Q61371 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ift88Q61371 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ift88Q61371 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ift88Q61371 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ift88Q61371 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ift88Q61371 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ift88Q61371 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ift88Q61371 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ift88Q61371 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ift88Q61371 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ift88Q61371 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ift88Q61371 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ift88Q61371 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ift88Q61371 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ift88Q61371 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ift88Q61371 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.67■□□□□ 0.9
Ift88Q61371 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.67■□□□□ 0.9
Ift88Q61371 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ift88Q61371 Gm21956-201ENSMUST00000179946 522 ntBASIC20.67■□□□□ 0.9
Ift88Q61371 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ift88Q61371 Mir7075-201ENSMUST00000184187 82 ntBASIC20.67■□□□□ 0.9
Ift88Q61371 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ift88Q61371 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ift88Q61371 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.67■□□□□ 0.9
Ift88Q61371 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ift88Q61371 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ift88Q61371 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ift88Q61371 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms