Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hif1aQ61221 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hif1aQ61221 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.89■□□□□ 0.61
Hif1aQ61221 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hif1aQ61221 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hif1aQ61221 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hif1aQ61221 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hif1aQ61221 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hif1aQ61221 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hif1aQ61221 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hif1aQ61221 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hif1aQ61221 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hif1aQ61221 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hif1aQ61221 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Hif1aQ61221 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Hif1aQ61221 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hif1aQ61221 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hif1aQ61221 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hif1aQ61221 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hif1aQ61221 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Hif1aQ61221 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hif1aQ61221 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hif1aQ61221 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hif1aQ61221 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Hif1aQ61221 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hif1aQ61221 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hif1aQ61221 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Hif1aQ61221 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
Hif1aQ61221 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Hif1aQ61221 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.87■□□□□ 0.61
Hif1aQ61221 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hif1aQ61221 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.87■□□□□ 0.61
Hif1aQ61221 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.87■□□□□ 0.61
Hif1aQ61221 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.87■□□□□ 0.61
Hif1aQ61221 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hif1aQ61221 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hif1aQ61221 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Hif1aQ61221 Rarb-207ENSMUST00000225921 2756 ntBASIC18.87■□□□□ 0.61
Hif1aQ61221 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hif1aQ61221 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Hif1aQ61221 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hif1aQ61221 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hif1aQ61221 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.86■□□□□ 0.61
Hif1aQ61221 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hif1aQ61221 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.86■□□□□ 0.61
Hif1aQ61221 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hif1aQ61221 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hif1aQ61221 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hif1aQ61221 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hif1aQ61221 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hif1aQ61221 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hif1aQ61221 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hif1aQ61221 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hif1aQ61221 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hif1aQ61221 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hif1aQ61221 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hif1aQ61221 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hif1aQ61221 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hif1aQ61221 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hif1aQ61221 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hif1aQ61221 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hif1aQ61221 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hif1aQ61221 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hif1aQ61221 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.85■□□□□ 0.61
Hif1aQ61221 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.85■□□□□ 0.61
Hif1aQ61221 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hif1aQ61221 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hif1aQ61221 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hif1aQ61221 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
Hif1aQ61221 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Hif1aQ61221 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hif1aQ61221 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hif1aQ61221 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.84■□□□□ 0.61
Hif1aQ61221 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hif1aQ61221 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hif1aQ61221 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hif1aQ61221 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Hif1aQ61221 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hif1aQ61221 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hif1aQ61221 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.84■□□□□ 0.61
Hif1aQ61221 Gm13241-201ENSMUST00000094493 780 ntBASIC18.84■□□□□ 0.61
Hif1aQ61221 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hif1aQ61221 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Hif1aQ61221 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hif1aQ61221 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hif1aQ61221 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hif1aQ61221 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.83■□□□□ 0.61
Hif1aQ61221 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hif1aQ61221 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.83■□□□□ 0.6
Hif1aQ61221 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hif1aQ61221 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hif1aQ61221 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Hif1aQ61221 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hif1aQ61221 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
Hif1aQ61221 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hif1aQ61221 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.82■□□□□ 0.6
Hif1aQ61221 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hif1aQ61221 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hif1aQ61221 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hif1aQ61221 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms