Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdf4Q61112 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sdf4Q61112 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sdf4Q61112 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sdf4Q61112 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sdf4Q61112 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sdf4Q61112 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Sdf4Q61112 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Sdf4Q61112 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Sdf4Q61112 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sdf4Q61112 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.02■□□□□ 0.64
Sdf4Q61112 Gm18671-201ENSMUST00000214826 683 ntBASIC19.02■□□□□ 0.64
Sdf4Q61112 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sdf4Q61112 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sdf4Q61112 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sdf4Q61112 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sdf4Q61112 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sdf4Q61112 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdf4Q61112 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdf4Q61112 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sdf4Q61112 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.01■□□□□ 0.63
Sdf4Q61112 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sdf4Q61112 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdf4Q61112 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sdf4Q61112 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sdf4Q61112 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sdf4Q61112 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sdf4Q61112 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sdf4Q61112 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sdf4Q61112 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sdf4Q61112 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Sdf4Q61112 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Sdf4Q61112 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sdf4Q61112 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdf4Q61112 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdf4Q61112 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdf4Q61112 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdf4Q61112 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sdf4Q61112 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sdf4Q61112 Gm42642-201ENSMUST00000200683 355 ntBASIC18.99■□□□□ 0.63
Sdf4Q61112 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdf4Q61112 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.99■□□□□ 0.63
Sdf4Q61112 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdf4Q61112 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.99■□□□□ 0.63
Sdf4Q61112 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.99■□□□□ 0.63
Sdf4Q61112 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sdf4Q61112 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdf4Q61112 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdf4Q61112 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Sdf4Q61112 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdf4Q61112 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdf4Q61112 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.98■□□□□ 0.63
Sdf4Q61112 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sdf4Q61112 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdf4Q61112 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Sdf4Q61112 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdf4Q61112 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdf4Q61112 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdf4Q61112 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdf4Q61112 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.98■□□□□ 0.63
Sdf4Q61112 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sdf4Q61112 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sdf4Q61112 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdf4Q61112 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdf4Q61112 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Sdf4Q61112 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Sdf4Q61112 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Sdf4Q61112 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdf4Q61112 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdf4Q61112 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sdf4Q61112 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.97■□□□□ 0.63
Sdf4Q61112 Gm10033-202ENSMUST00000211874 928 ntBASIC18.97■□□□□ 0.63
Sdf4Q61112 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdf4Q61112 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Sdf4Q61112 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sdf4Q61112 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Sdf4Q61112 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sdf4Q61112 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Sdf4Q61112 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdf4Q61112 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdf4Q61112 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdf4Q61112 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Sdf4Q61112 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdf4Q61112 Gm13534-201ENSMUST00000121169 513 ntBASIC18.96■□□□□ 0.63
Sdf4Q61112 Gm8495-201ENSMUST00000188740 694 ntBASIC18.96■□□□□ 0.63
Sdf4Q61112 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdf4Q61112 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdf4Q61112 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdf4Q61112 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sdf4Q61112 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdf4Q61112 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdf4Q61112 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sdf4Q61112 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdf4Q61112 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdf4Q61112 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sdf4Q61112 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sdf4Q61112 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdf4Q61112 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sdf4Q61112 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdf4Q61112 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms