Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxf1Q61080 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxf1Q61080 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
Foxf1Q61080 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Foxf1Q61080 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxf1Q61080 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.7■□□□□ 0.1
Foxf1Q61080 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxf1Q61080 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxf1Q61080 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxf1Q61080 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxf1Q61080 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxf1Q61080 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.7■□□□□ 0.1
Foxf1Q61080 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.7■□□□□ 0.1
Foxf1Q61080 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Foxf1Q61080 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Foxf1Q61080 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxf1Q61080 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxf1Q61080 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxf1Q61080 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxf1Q61080 Gm7860-201ENSMUST00000121190 879 ntBASIC15.69■□□□□ 0.1
Foxf1Q61080 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.69■□□□□ 0.1
Foxf1Q61080 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Foxf1Q61080 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Foxf1Q61080 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxf1Q61080 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxf1Q61080 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxf1Q61080 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Foxf1Q61080 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Foxf1Q61080 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxf1Q61080 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Foxf1Q61080 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxf1Q61080 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxf1Q61080 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxf1Q61080 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.68■□□□□ 0.1
Foxf1Q61080 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxf1Q61080 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Foxf1Q61080 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Foxf1Q61080 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Foxf1Q61080 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.68■□□□□ 0.1
Foxf1Q61080 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxf1Q61080 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Foxf1Q61080 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Foxf1Q61080 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Foxf1Q61080 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxf1Q61080 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Foxf1Q61080 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Foxf1Q61080 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxf1Q61080 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.67■□□□□ 0.1
Foxf1Q61080 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxf1Q61080 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Foxf1Q61080 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Foxf1Q61080 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxf1Q61080 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Foxf1Q61080 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Foxf1Q61080 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxf1Q61080 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxf1Q61080 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.66■□□□□ 0.1
Foxf1Q61080 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxf1Q61080 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.66■□□□□ 0.1
Foxf1Q61080 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxf1Q61080 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Foxf1Q61080 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxf1Q61080 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Foxf1Q61080 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.66■□□□□ 0.1
Foxf1Q61080 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxf1Q61080 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.66■□□□□ 0.1
Foxf1Q61080 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Foxf1Q61080 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxf1Q61080 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Foxf1Q61080 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Foxf1Q61080 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Foxf1Q61080 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Foxf1Q61080 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Foxf1Q61080 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxf1Q61080 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxf1Q61080 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Foxf1Q61080 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxf1Q61080 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxf1Q61080 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxf1Q61080 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.65■□□□□ 0.1
Foxf1Q61080 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.65■□□□□ 0.1
Foxf1Q61080 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxf1Q61080 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxf1Q61080 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.65■□□□□ 0.1
Foxf1Q61080 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxf1Q61080 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxf1Q61080 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxf1Q61080 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Foxf1Q61080 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.64■□□□□ 0.1
Foxf1Q61080 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxf1Q61080 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxf1Q61080 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxf1Q61080 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Foxf1Q61080 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Foxf1Q61080 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Foxf1Q61080 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Foxf1Q61080 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.64■□□□□ 0.09
Foxf1Q61080 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.64■□□□□ 0.09
Foxf1Q61080 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Foxf1Q61080 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms