Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sim2Q61079 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sim2Q61079 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sim2Q61079 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sim2Q61079 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sim2Q61079 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sim2Q61079 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sim2Q61079 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sim2Q61079 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.33■□□□□ 0.52
Sim2Q61079 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sim2Q61079 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sim2Q61079 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.33■□□□□ 0.52
Sim2Q61079 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.33■□□□□ 0.52
Sim2Q61079 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sim2Q61079 Gm21362-201ENSMUST00000194272 928 ntBASIC18.33■□□□□ 0.52
Sim2Q61079 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sim2Q61079 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sim2Q61079 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sim2Q61079 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sim2Q61079 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Sim2Q61079 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sim2Q61079 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sim2Q61079 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sim2Q61079 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sim2Q61079 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sim2Q61079 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sim2Q61079 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sim2Q61079 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Sim2Q61079 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sim2Q61079 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.31■□□□□ 0.52
Sim2Q61079 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sim2Q61079 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sim2Q61079 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sim2Q61079 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sim2Q61079 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sim2Q61079 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sim2Q61079 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sim2Q61079 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sim2Q61079 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sim2Q61079 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sim2Q61079 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sim2Q61079 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Sim2Q61079 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Sim2Q61079 Gm10819-201ENSMUST00000099988 561 ntBASIC18.3■□□□□ 0.52
Sim2Q61079 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sim2Q61079 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Sim2Q61079 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sim2Q61079 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Sim2Q61079 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sim2Q61079 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.29■□□□□ 0.52
Sim2Q61079 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sim2Q61079 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Sim2Q61079 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sim2Q61079 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Sim2Q61079 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sim2Q61079 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sim2Q61079 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sim2Q61079 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sim2Q61079 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sim2Q61079 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sim2Q61079 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sim2Q61079 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sim2Q61079 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sim2Q61079 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Sim2Q61079 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Sim2Q61079 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.28■□□□□ 0.52
Sim2Q61079 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sim2Q61079 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.28■□□□□ 0.52
Sim2Q61079 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sim2Q61079 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sim2Q61079 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sim2Q61079 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sim2Q61079 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sim2Q61079 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sim2Q61079 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sim2Q61079 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sim2Q61079 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sim2Q61079 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sim2Q61079 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Sim2Q61079 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sim2Q61079 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Sim2Q61079 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sim2Q61079 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sim2Q61079 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.27■□□□□ 0.52
Sim2Q61079 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.27■□□□□ 0.52
Sim2Q61079 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.27■□□□□ 0.52
Sim2Q61079 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.27■□□□□ 0.52
Sim2Q61079 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.27■□□□□ 0.52
Sim2Q61079 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sim2Q61079 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sim2Q61079 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sim2Q61079 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Sim2Q61079 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sim2Q61079 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sim2Q61079 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sim2Q61079 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sim2Q61079 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sim2Q61079 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sim2Q61079 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sim2Q61079 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms