Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a4Q60857 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a4Q60857 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Slc6a4Q60857 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.25■□□□□ 0.67
Slc6a4Q60857 Gm12527-201ENSMUST00000117967 564 ntBASIC19.25■□□□□ 0.67
Slc6a4Q60857 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.25■□□□□ 0.67
Slc6a4Q60857 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a4Q60857 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.25■□□□□ 0.67
Slc6a4Q60857 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a4Q60857 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Slc6a4Q60857 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a4Q60857 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a4Q60857 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a4Q60857 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a4Q60857 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a4Q60857 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a4Q60857 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a4Q60857 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a4Q60857 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Slc6a4Q60857 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a4Q60857 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a4Q60857 Gm10653-202ENSMUST00000139570 835 ntBASIC19.24■□□□□ 0.67
Slc6a4Q60857 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.24■□□□□ 0.67
Slc6a4Q60857 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Slc6a4Q60857 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a4Q60857 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a4Q60857 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a4Q60857 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a4Q60857 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a4Q60857 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a4Q60857 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.23■□□□□ 0.67
Slc6a4Q60857 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.23■□□□□ 0.67
Slc6a4Q60857 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a4Q60857 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.23■□□□□ 0.67
Slc6a4Q60857 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Slc6a4Q60857 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a4Q60857 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a4Q60857 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.23■□□□□ 0.67
Slc6a4Q60857 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.22■□□□□ 0.67
Slc6a4Q60857 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a4Q60857 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a4Q60857 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a4Q60857 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a4Q60857 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a4Q60857 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.22■□□□□ 0.67
Slc6a4Q60857 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a4Q60857 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.22■□□□□ 0.67
Slc6a4Q60857 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a4Q60857 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a4Q60857 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a4Q60857 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a4Q60857 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a4Q60857 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a4Q60857 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.21■□□□□ 0.67
Slc6a4Q60857 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.21■□□□□ 0.67
Slc6a4Q60857 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a4Q60857 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a4Q60857 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.21■□□□□ 0.67
Slc6a4Q60857 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a4Q60857 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a4Q60857 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a4Q60857 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a4Q60857 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.21■□□□□ 0.67
Slc6a4Q60857 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a4Q60857 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Slc6a4Q60857 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a4Q60857 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a4Q60857 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Slc6a4Q60857 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a4Q60857 Rab3c-203ENSMUST00000224180 967 ntBASIC19.2■□□□□ 0.66
Slc6a4Q60857 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a4Q60857 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Slc6a4Q60857 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Slc6a4Q60857 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a4Q60857 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a4Q60857 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a4Q60857 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a4Q60857 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a4Q60857 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a4Q60857 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a4Q60857 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a4Q60857 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Slc6a4Q60857 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a4Q60857 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a4Q60857 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Slc6a4Q60857 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a4Q60857 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a4Q60857 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a4Q60857 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a4Q60857 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.19■□□□□ 0.66
Slc6a4Q60857 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a4Q60857 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a4Q60857 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Slc6a4Q60857 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Slc6a4Q60857 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a4Q60857 Gm20049-201ENSMUST00000219950 730 ntBASIC19.18■□□□□ 0.66
Slc6a4Q60857 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a4Q60857 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a4Q60857 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.18■□□□□ 0.66
Slc6a4Q60857 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms