Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pabpn1lQ5XFR0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pabpn1lQ5XFR0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.77■□□□□ 0.6
Pabpn1lQ5XFR0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pabpn1lQ5XFR0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pabpn1lQ5XFR0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Pabpn1lQ5XFR0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pabpn1lQ5XFR0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pabpn1lQ5XFR0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pabpn1lQ5XFR0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pabpn1lQ5XFR0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pabpn1lQ5XFR0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pabpn1lQ5XFR0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Pabpn1lQ5XFR0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pabpn1lQ5XFR0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pabpn1lQ5XFR0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pabpn1lQ5XFR0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pabpn1lQ5XFR0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.76■□□□□ 0.59
Pabpn1lQ5XFR0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pabpn1lQ5XFR0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pabpn1lQ5XFR0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pabpn1lQ5XFR0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pabpn1lQ5XFR0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pabpn1lQ5XFR0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pabpn1lQ5XFR0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pabpn1lQ5XFR0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pabpn1lQ5XFR0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pabpn1lQ5XFR0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pabpn1lQ5XFR0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pabpn1lQ5XFR0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pabpn1lQ5XFR0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pabpn1lQ5XFR0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pabpn1lQ5XFR0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pabpn1lQ5XFR0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.74■□□□□ 0.59
Pabpn1lQ5XFR0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1lQ5XFR0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1lQ5XFR0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1lQ5XFR0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1lQ5XFR0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1lQ5XFR0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1lQ5XFR0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1lQ5XFR0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1lQ5XFR0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1lQ5XFR0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pabpn1lQ5XFR0 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.74■□□□□ 0.59
Pabpn1lQ5XFR0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pabpn1lQ5XFR0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pabpn1lQ5XFR0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pabpn1lQ5XFR0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pabpn1lQ5XFR0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pabpn1lQ5XFR0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Pabpn1lQ5XFR0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pabpn1lQ5XFR0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pabpn1lQ5XFR0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pabpn1lQ5XFR0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pabpn1lQ5XFR0 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pabpn1lQ5XFR0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1lQ5XFR0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.72■□□□□ 0.59
Pabpn1lQ5XFR0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pabpn1lQ5XFR0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1lQ5XFR0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1lQ5XFR0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1lQ5XFR0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pabpn1lQ5XFR0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1lQ5XFR0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1lQ5XFR0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1lQ5XFR0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1lQ5XFR0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1lQ5XFR0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1lQ5XFR0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1lQ5XFR0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pabpn1lQ5XFR0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pabpn1lQ5XFR0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pabpn1lQ5XFR0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pabpn1lQ5XFR0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.71■□□□□ 0.59
Pabpn1lQ5XFR0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pabpn1lQ5XFR0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pabpn1lQ5XFR0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pabpn1lQ5XFR0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pabpn1lQ5XFR0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pabpn1lQ5XFR0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pabpn1lQ5XFR0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Pabpn1lQ5XFR0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pabpn1lQ5XFR0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pabpn1lQ5XFR0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pabpn1lQ5XFR0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pabpn1lQ5XFR0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pabpn1lQ5XFR0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Pabpn1lQ5XFR0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pabpn1lQ5XFR0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pabpn1lQ5XFR0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pabpn1lQ5XFR0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pabpn1lQ5XFR0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pabpn1lQ5XFR0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pabpn1lQ5XFR0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pabpn1lQ5XFR0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pabpn1lQ5XFR0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pabpn1lQ5XFR0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pabpn1lQ5XFR0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pabpn1lQ5XFR0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms