Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ubr3Q5U430 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ubr3Q5U430 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ubr3Q5U430 Gm7367-201ENSMUST00000057611 492 ntBASIC23.12■■□□□ 1.29
Ubr3Q5U430 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ubr3Q5U430 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ubr3Q5U430 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Ubr3Q5U430 Gm5540-201ENSMUST00000131852 1848 ntBASIC23.12■■□□□ 1.29
Ubr3Q5U430 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC23.11■■□□□ 1.29
Ubr3Q5U430 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC23.11■■□□□ 1.29
Ubr3Q5U430 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ubr3Q5U430 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ubr3Q5U430 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Ubr3Q5U430 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC23.11■■□□□ 1.29
Ubr3Q5U430 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC23.11■■□□□ 1.29
Ubr3Q5U430 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC23.11■■□□□ 1.29
Ubr3Q5U430 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ubr3Q5U430 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ubr3Q5U430 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ubr3Q5U430 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ubr3Q5U430 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ubr3Q5U430 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ubr3Q5U430 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ubr3Q5U430 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ubr3Q5U430 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ubr3Q5U430 Gm21362-201ENSMUST00000194272 928 ntBASIC23.1■■□□□ 1.29
Ubr3Q5U430 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ubr3Q5U430 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ubr3Q5U430 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ubr3Q5U430 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ubr3Q5U430 Gm43183-201ENSMUST00000200632 547 ntBASIC23.09■■□□□ 1.29
Ubr3Q5U430 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ubr3Q5U430 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC23.09■■□□□ 1.29
Ubr3Q5U430 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Ubr3Q5U430 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ubr3Q5U430 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ubr3Q5U430 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ubr3Q5U430 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
Ubr3Q5U430 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ubr3Q5U430 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ubr3Q5U430 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ubr3Q5U430 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Ubr3Q5U430 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ubr3Q5U430 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC23.08■■□□□ 1.29
Ubr3Q5U430 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ubr3Q5U430 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
Ubr3Q5U430 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ubr3Q5U430 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ubr3Q5U430 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr3Q5U430 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr3Q5U430 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr3Q5U430 Otx2os1-204ENSMUST00000227221 751 ntBASIC23.07■■□□□ 1.28
Ubr3Q5U430 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr3Q5U430 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC23.07■■□□□ 1.28
Ubr3Q5U430 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr3Q5U430 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr3Q5U430 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr3Q5U430 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr3Q5U430 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr3Q5U430 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ubr3Q5U430 Gm37352-201ENSMUST00000193908 2181 ntBASIC23.06■■□□□ 1.28
Ubr3Q5U430 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ubr3Q5U430 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Ubr3Q5U430 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ubr3Q5U430 Gm45560-201ENSMUST00000211492 1472 ntBASIC23.06■■□□□ 1.28
Ubr3Q5U430 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ubr3Q5U430 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC23.06■■□□□ 1.28
Ubr3Q5U430 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ubr3Q5U430 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ubr3Q5U430 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ubr3Q5U430 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC23.05■■□□□ 1.28
Ubr3Q5U430 Timm23-208ENSMUST00000226683 750 ntBASIC23.05■■□□□ 1.28
Ubr3Q5U430 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Ubr3Q5U430 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ubr3Q5U430 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Ubr3Q5U430 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ubr3Q5U430 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ubr3Q5U430 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ubr3Q5U430 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ubr3Q5U430 Gm37292-201ENSMUST00000192062 758 ntBASIC23.05■■□□□ 1.28
Ubr3Q5U430 Odf3b-204ENSMUST00000227834 930 ntBASIC23.05■■□□□ 1.28
Ubr3Q5U430 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr3Q5U430 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr3Q5U430 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr3Q5U430 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Ubr3Q5U430 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr3Q5U430 Gm15375-201ENSMUST00000119510 849 ntBASIC23.04■■□□□ 1.28
Ubr3Q5U430 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Ubr3Q5U430 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC23.04■■□□□ 1.28
Ubr3Q5U430 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr3Q5U430 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr3Q5U430 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr3Q5U430 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr3Q5U430 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ubr3Q5U430 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ubr3Q5U430 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC23.03■■□□□ 1.28
Ubr3Q5U430 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Ubr3Q5U430 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ubr3Q5U430 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Ubr3Q5U430 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms