Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim38Q5SZ99 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
Trim38Q5SZ99 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim38Q5SZ99 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim38Q5SZ99 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim38Q5SZ99 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
Trim38Q5SZ99 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim38Q5SZ99 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim38Q5SZ99 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim38Q5SZ99 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim38Q5SZ99 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim38Q5SZ99 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim38Q5SZ99 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.44■□□□□ 0.7
Trim38Q5SZ99 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim38Q5SZ99 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.44■□□□□ 0.7
Trim38Q5SZ99 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim38Q5SZ99 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim38Q5SZ99 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim38Q5SZ99 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim38Q5SZ99 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim38Q5SZ99 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Trim38Q5SZ99 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim38Q5SZ99 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim38Q5SZ99 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim38Q5SZ99 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim38Q5SZ99 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim38Q5SZ99 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim38Q5SZ99 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.43■□□□□ 0.7
Trim38Q5SZ99 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim38Q5SZ99 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Trim38Q5SZ99 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim38Q5SZ99 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trim38Q5SZ99 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim38Q5SZ99 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim38Q5SZ99 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim38Q5SZ99 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim38Q5SZ99 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim38Q5SZ99 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim38Q5SZ99 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim38Q5SZ99 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trim38Q5SZ99 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trim38Q5SZ99 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim38Q5SZ99 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Trim38Q5SZ99 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.42■□□□□ 0.7
Trim38Q5SZ99 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim38Q5SZ99 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim38Q5SZ99 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim38Q5SZ99 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Trim38Q5SZ99 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim38Q5SZ99 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim38Q5SZ99 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.41■□□□□ 0.7
Trim38Q5SZ99 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.41■□□□□ 0.7
Trim38Q5SZ99 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim38Q5SZ99 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim38Q5SZ99 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.41■□□□□ 0.7
Trim38Q5SZ99 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim38Q5SZ99 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.41■□□□□ 0.7
Trim38Q5SZ99 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim38Q5SZ99 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim38Q5SZ99 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim38Q5SZ99 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim38Q5SZ99 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim38Q5SZ99 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trim38Q5SZ99 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim38Q5SZ99 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim38Q5SZ99 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim38Q5SZ99 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim38Q5SZ99 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim38Q5SZ99 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim38Q5SZ99 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim38Q5SZ99 Gm9988-201ENSMUST00000069786 435 ntBASIC19.4■□□□□ 0.7
Trim38Q5SZ99 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim38Q5SZ99 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim38Q5SZ99 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim38Q5SZ99 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim38Q5SZ99 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Trim38Q5SZ99 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim38Q5SZ99 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim38Q5SZ99 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim38Q5SZ99 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim38Q5SZ99 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim38Q5SZ99 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trim38Q5SZ99 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim38Q5SZ99 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim38Q5SZ99 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trim38Q5SZ99 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim38Q5SZ99 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim38Q5SZ99 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim38Q5SZ99 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim38Q5SZ99 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim38Q5SZ99 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim38Q5SZ99 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim38Q5SZ99 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim38Q5SZ99 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim38Q5SZ99 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim38Q5SZ99 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim38Q5SZ99 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim38Q5SZ99 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.38■□□□□ 0.69
Trim38Q5SZ99 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim38Q5SZ99 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms