Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Trav6-2Q5R1I4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-2Q5R1I4 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.49■□□□□ 0.23
Trav6-2Q5R1I4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.49■□□□□ 0.23
Trav6-2Q5R1I4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav6-2Q5R1I4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-2Q5R1I4 Gm5643-201ENSMUST00000117081 966 ntBASIC16.49■□□□□ 0.23
Trav6-2Q5R1I4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav6-2Q5R1I4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.49■□□□□ 0.23
Trav6-2Q5R1I4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-2Q5R1I4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-2Q5R1I4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-2Q5R1I4 Dio3-201ENSMUST00000097228 1449 ntBASIC16.49■□□□□ 0.23
Trav6-2Q5R1I4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-2Q5R1I4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-2Q5R1I4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-2Q5R1I4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-2Q5R1I4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-2Q5R1I4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-2Q5R1I4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-2Q5R1I4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-2Q5R1I4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-2Q5R1I4 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.48■□□□□ 0.23
Trav6-2Q5R1I4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Trav6-2Q5R1I4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Trav6-2Q5R1I4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-2Q5R1I4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-2Q5R1I4 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.48■□□□□ 0.23
Trav6-2Q5R1I4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-2Q5R1I4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-2Q5R1I4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-2Q5R1I4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-2Q5R1I4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav6-2Q5R1I4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav6-2Q5R1I4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-2Q5R1I4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav6-2Q5R1I4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-2Q5R1I4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav6-2Q5R1I4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-2Q5R1I4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-2Q5R1I4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav6-2Q5R1I4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-2Q5R1I4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-2Q5R1I4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-2Q5R1I4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-2Q5R1I4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-2Q5R1I4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-2Q5R1I4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-2Q5R1I4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav6-2Q5R1I4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav6-2Q5R1I4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-2Q5R1I4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-2Q5R1I4 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.46■□□□□ 0.23
Trav6-2Q5R1I4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-2Q5R1I4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.46■□□□□ 0.23
Trav6-2Q5R1I4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-2Q5R1I4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-2Q5R1I4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-2Q5R1I4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Trav6-2Q5R1I4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-2Q5R1I4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.46■□□□□ 0.22
Trav6-2Q5R1I4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav6-2Q5R1I4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6-2Q5R1I4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trav6-2Q5R1I4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Trav6-2Q5R1I4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-2Q5R1I4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Trav6-2Q5R1I4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-2Q5R1I4 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.44■□□□□ 0.22
Trav6-2Q5R1I4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-2Q5R1I4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-2Q5R1I4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-2Q5R1I4 Mir7071-201ENSMUST00000184847 69 ntBASIC16.44■□□□□ 0.22
Trav6-2Q5R1I4 Gm18666-201ENSMUST00000190039 958 ntBASIC16.44■□□□□ 0.22
Trav6-2Q5R1I4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trav6-2Q5R1I4 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.44■□□□□ 0.22
Trav6-2Q5R1I4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-2Q5R1I4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6-2Q5R1I4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms