Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav7d-3Q5R1I1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav7d-3Q5R1I1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Gm18688-201ENSMUST00000204695 1859 ntBASIC13.72□□□□□ -0.21
Trav7d-3Q5R1I1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav7d-3Q5R1I1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7d-3Q5R1I1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7d-3Q5R1I1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7d-3Q5R1I1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7d-3Q5R1I1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7d-3Q5R1I1 Gm11421-201ENSMUST00000122124 294 ntBASIC13.71□□□□□ -0.21
Trav7d-3Q5R1I1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7d-3Q5R1I1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7d-3Q5R1I1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7d-3Q5R1I1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Trav7d-3Q5R1I1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7d-3Q5R1I1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7d-3Q5R1I1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav7d-3Q5R1I1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trav7d-3Q5R1I1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav7d-3Q5R1I1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav7d-3Q5R1I1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trav7d-3Q5R1I1 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.71□□□□□ -0.22
Trav7d-3Q5R1I1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 Gm12821-201ENSMUST00000120022 600 ntBASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 Mir7075-201ENSMUST00000184187 82 ntBASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 Wdr70-203ENSMUST00000227371 1130 ntBASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms